simulatorAPMS 1.14.0
Tony Chiang
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/simulatorAPMS | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | [ OK ] |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
INSTALLATION WITH 'R CMD INSTALL --library=simulatorAPMS.buildbin-libdir simulatorAPMS_1.14.0.tar.gz'
* Installing *source* package 'simulatorAPMS' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: graph
Loading required package: apComplex
Loading required package: RBGL
Loading required package: Rgraphviz
Loading required package: grid
Loading required package: org.Sc.sgd.db
Loading required package: AnnotationDbi
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: DBI
Loading required package: ScISI
Loading required package: GO.db
Loading required package: GOstats
Loading required package: annotate
Loading required package: xtable
Attaching package: 'annotate'
The following object(s) are masked from package:Rgraphviz :
toFile
Loading required package: Category
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: RpsiXML
Loading required package: XML
Attaching package: 'XML'
The following object(s) are masked from package:graph :
addNode
Loading required package: hypergraph
Attaching package: 'hypergraph'
The following object(s) are masked from package:xtable :
label,
label<-
The following object(s) are masked from package:AnnotationDbi :
head,
tail
The following object(s) are masked from package:Rgraphviz :
head,
tail
The following object(s) are masked from package:utils :
head,
tail
Loading required package: ppiStats
Loading required package: ppiData
Loading required package: lattice
Loading required package: RColorBrewer
** help
>>> Building/Updating help pages for package 'simulatorAPMS'
Formats: text html latex example
Note: removing empty section \source in file 'APComEX.Rd'
Note: removing empty section \references in file 'APComEX.Rd'
APComEX text html latex example
Note: removing empty section \source in file 'PPIEX.Rd'
Note: removing empty section \references in file 'PPIEX.Rd'
PPIEX text html latex example
Note: removing empty section \details in file 'TSNMatrix.Rd'
TSNMatrix text html latex example
applyDeformationError text html latex example
applyFNErrors text html latex example
applyFPErrors text html latex example
applyStickyError text html latex example
Note: removing empty section \details in file 'compIndep.Rd'
compIndep text html latex example
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filteredProt text html latex example
Note: removing empty section \source in file 'fullSimEX.Rd'
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fullSimEX text html latex example
Note: removing empty section \source in file 'missedProtEX.Rd'
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missedProtEX text html latex example
Note: removing empty section \source in file 'missedProtHMSPCI.Rd'
Note: removing empty section \details in file 'missedProtHMSPCI.Rd'
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missedProtHMSPCI text html latex example
recordSticky text html latex example
runAPComplex text html latex example
runCompIndep text html latex example
Note: removing empty section \source in file 'runSimEX.Rd'
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runSimEX text html latex example
runSimulators text html latex example
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simEX text html latex example
simulator text html latex example
simulatorD text html latex example
simulatorS text html latex example
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vBaits text html latex example
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vBaitsEX text html latex example
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vDeformEX text html latex example
vDeformed text html latex example
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vDeformedEX text html latex example
Note: removing empty section \source in file 'vStickyEX.Rd'
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vStickyEX text html latex example
** building package indices ...
* DONE (simulatorAPMS)