ontoTools 1.20.0
Vince Carey
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/ontoTools | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | [ OK ] |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/ontoTools.buildbin-libdir
Using auto-selected zip options 'ontoTools-ZIPDATA=zip'
---------- Making package ontoTools ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing data files
preparing package ontoTools for lazy loading
Loading required package: graph
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: AnnotationDbi
Loading required package: SparseM
Attaching package: 'SparseM'
The following object(s) are masked from package:stats :
model.response
The following object(s) are masked from package:base :
backsolve,
chol
Loading required package: GO.db
Loading required package: DBI
Loading required package: annotate
Loading required package: xtable
Creating a new generic function for "grep" in "ontoTools"
installing man source files
installing indices
zipping data
installing help
>>> Building/Updating help pages for package 'ontoTools'
Formats: text html latex example chm
Note: removing empty section \references in file 'A.csr.Rd'
Note: removing empty section \references in file 'A.csr.Rd'
A.csr text html latex chm
Note: removing empty section \value in file 'GDI.Rd'
Note: removing empty section \references in file 'GDI.Rd'
Note: removing empty section \value in file 'GDI.Rd'
Note: removing empty section \references in file 'GDI.Rd'
GDI text html latex example chm
LLGOMFcp text html latex chm
OOC-class text html latex example chm
Note: removing empty section \references in file 'SGDIvocab.Rd'
Note: removing empty section \references in file 'SGDIvocab.Rd'
SGDIvocab text html latex example chm
Note: removing empty section \value in file 'STMA.Rd'
Note: removing empty section \details in file 'STMA.Rd'
Note: removing empty section \references in file 'STMA.Rd'
Note: removing empty section \value in file 'STMA.Rd'
Note: removing empty section \details in file 'STMA.Rd'
Note: removing empty section \references in file 'STMA.Rd'
STMA text html latex example chm
Note: removing empty section \details in file 'accessMat.Rd'
Note: removing empty section \examples in file 'accessMat.Rd'
Note: removing empty section \details in file 'accessMat.Rd'
Note: removing empty section \examples in file 'accessMat.Rd'
accessMat text html latex chm
buildGOgraph text html latex example chm
Note: removing empty section \examples in file 'compoundGraph-class.Rd'
Note: removing empty section \examples in file 'compoundGraph-class.Rd'
compoundGraph-class text html latex chm
depthStruct text html latex example chm
gomfAmat text html latex chm
Note: removing empty section \source in file 'litOnto.Rd'
Note: removing empty section \references in file 'litOnto.Rd'
Note: removing empty section \source in file 'litOnto.Rd'
Note: removing empty section \references in file 'litOnto.Rd'
litOnto text html latex chm
namedSparse-class text html latex example chm
ontology-class text html latex example chm
Note: removing empty section \references in file 'ooMapLL2GOMFdemo.Rd'
Note: removing empty section \references in file 'ooMapLL2GOMFdemo.Rd'
ooMapLL2GOMFdemo text html latex chm
otkvEnv2namedSparse text html latex example chm
Note: removing empty section \examples in file 'rootedDAG-class.Rd'
Note: removing empty section \examples in file 'rootedDAG-class.Rd'
rootedDAG-class text html latex chm
semsim text html latex example chm
Note: removing empty section \references in file 'taggedHierNomenclature-class.Rd'
Note: removing empty section \references in file 'taggedHierNomenclature-class.Rd'
taggedHierNomenclature-class text html latex example chm
toDot-methods text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\R.INSTALL.3972\ontoTools\chm\ontoTools.chm
Compile time: 0 minutes, 2 seconds
21 Topics
179 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\R.INSTALL.3972\ontoTools\chm\ontoTools.chm, 43,882 bytes
Compression decreased file by 62,162 bytes.
adding MD5 sums
packaged installation of package 'ontoTools' as ontoTools_1.20.0.zip
* DONE (ontoTools)