affycoretools 1.14.1
James W. MacDonald
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/affycoretools | | Last Changed Rev: 36977 / Revision: 38965 | | Last Changed Date: 2009-01-27 09:15:41 -0800 (Tue, 27 Jan 2009) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | [ OK ] | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
* checking for file 'affycoretools/DESCRIPTION' ... OK
* preparing 'affycoretools':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.3-bioc/tmpdir/Rinst484864840
---------- Making package affycoretools ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
preparing package affycoretools for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: limma
Loading required package: GOstats
Loading required package: graph
Loading required package: GO.db
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: annotate
Loading required package: xtable
Loading required package: RBGL
Loading required package: Category
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: biomaRt
Attaching package: 'biomaRt'
The following object(s) are masked from package:annotate :
getGO
Loading required package: gcrma
Loading required package: matchprobes
Loading required package: annaffy
Loading required package: KEGG.db
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'affycoretools'
Formats: text html latex example chm
affystart text html latex chm
annBM text html latex example chm
convert.back text html latex chm
extractStats text html latex chm
foldFilt text html latex chm
foldFiltBM text html latex chm
getCols text html latex chm
getIndex text html latex chm
getOrder text html latex chm
getUniqueLL text html latex chm
getans text html latex chm
houtSig text html latex chm
hyperG2annaffy text html latex chm
hyperGoutput text html latex chm
intNames text html latex chm
limma2annaffy text html latex chm
limma2biomaRt text html latex chm
make.cl text html latex chm
makeFCList text html latex chm
makeIndices text html latex chm
pca.legend text html latex chm
plotDeg text html latex example chm
plotMA text html latex chm
plotPCA text html latex chm
probes2table text html latex chm
probes2tableBM text html latex chm
tableFilt text html latex chm
vennCounts2 text html latex example chm
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Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\affycoretools\chm\affycoretools.chm
Compile time: 0 minutes, 27 seconds
32 Topics
52 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\affycoretools\chm\affycoretools.chm, 62,548 bytes
Compression decreased file by 78,925 bytes.
adding MD5 sums
* DONE (affycoretools)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'affycoretools_1.14.1.tar.gz'