PGSEA 1.10.0
Karl Dykema
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/PGSEA | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/PGSEA.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'PGSEA/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'PGSEA' version '1.10.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'PGSEA' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating PGSEA-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating PGSEA-manual.tex ... OK
* checking PGSEA-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/PGSEA.Rcheck
---------- Making package PGSEA ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing data files
preparing package PGSEA for lazy loading
Loading required package: AnnotationDbi
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: Ruuid
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'PGSEA'
Formats: text html latex example chm
GOLUBmcs text html latex example chm
PGSEA text html latex example chm
VAIgsc text html latex example chm
VAImcs text html latex example chm
aggregateExprs text html latex example chm
convertSmc text html latex example chm
editSmc text html latex example chm
go2smc text html latex example chm
kegg2smc text html latex example chm
nbEset text html latex example chm
readGmt text html latex example chm
readSmc text html latex example chm
scanSmc text html latex example chm
smcPlot text html latex example chm
writeGmt text html latex example chm
writeSmc text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\PGSEA.Rcheck\00_pkg_src\PGSEA\chm\PGSEA.chm
Compile time: 0 minutes, 0 seconds
17 Topics
37 Local links
9 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\PGSEA.Rcheck\00_pkg_src\PGSEA\chm\PGSEA.chm, 30,732 bytes
Compression decreased file by 12,791 bytes.
adding MD5 sums
* DONE (PGSEA)