BicARE 1.0.0
Pierre Gestraud ,
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/BicARE | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/BicARE.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'BicARE/DESCRIPTION' ... OK
* this is package 'BicARE' version '1.0.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'BicARE' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating BicARE-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating BicARE-manual.tex ... OK
* checking BicARE-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/BicARE.Rcheck
---------- Making package BicARE ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making BicARE.d from BicARE.c
gcc -std=gnu99 -Ie:/biocbld/bbs-2.3-bioc/R/include -O3 -Wall -c BicARE.c -o BicARE.o
BicARE.c: In function 'floc':
BicARE.c:439: warning: unused variable 'invk'
BicARE.c: In function 'action':
BicARE.c:270: warning: 'j' may be used uninitialized in this function
BicARE.c:270: warning: 'i' may be used uninitialized in this function
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.3-bioc/R/include -i BicARE_res.rc -o BicARE_res.o
gcc -std=gnu99 -shared -s -o BicARE.dll BicARE.def BicARE.o BicARE_res.o -Le:/biocbld/bbs-2.3-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
installing inst files
installing data files
preparing package BicARE for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: multtest
Loading required package: GSEABase
Loading required package: AnnotationDbi
Loading required package: annotate
Loading required package: xtable
Loading required package: graph
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'BicARE'
Formats: text html latex example chm
BicARE-package text html latex chm
FLOC text html latex example chm
bicluster text html latex example chm
makeReport text html latex example chm
residue text html latex example chm
sample.bicData text html latex chm
sample.biclustering text html latex chm
testAnnot text html latex example chm
testSet text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\BicARE.Rcheck\00_pkg_src\BicARE\chm\BicARE.chm
Compile time: 0 minutes, 0 seconds
10 Topics
27 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\BicARE.Rcheck\00_pkg_src\BicARE\chm\BicARE.chm, 25,567 bytes
Compression decreased file by 5,114 bytes.
adding MD5 sums
* DONE (BicARE)