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Package 178/260HostnameOS / ArchBUILDCHECKBUILD BIN
pgUtils 1.12.0
Johannes Rainer
Snapshot Date: 2008-10-16 00:10:09 -0700 (Thu, 16 Oct 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/pgUtils
Last Changed Rev: 31430 / Revision: 34573
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 N O T   S U P P O R T E D
pitt Mac OS X Tiger (10.4.11) / i386  OK [ OK ] OK 
Package: pgUtils
Version: 1.12.0
Command: /Library/Frameworks/R.framework/Versions/2.7/Resources/bin/R CMD check pgUtils_1.12.0.tar.gz
StartedAt: 2008-10-16 05:53:17 -0700 (Thu, 16 Oct 2008)
EndedAt: 2008-10-16 05:53:57 -0700 (Thu, 16 Oct 2008)
EllapsedTime: 40.2 seconds
RetCode: 0
Status: OK
CheckDir: pgUtils.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.2-bioc/meat/pgUtils.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ASCII
* checking for file 'pgUtils/DESCRIPTION' ... OK
* this is package 'pgUtils' version '1.12.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'pgUtils' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
dbColnames: no visible binding for global variable 'res'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating pgUtils-Ex.R ... OK
* checking examples ... OK
* creating pgUtils-manual.tex ... OK
* checking pgUtils-manual.tex using pdflatex ... OK

pgUtils.Rcheck/00install.out:

* Installing *source* package 'pgUtils' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Rdbi
Loading required package: RdbiPgSQL

Attaching package: 'RdbiPgSQL'


	The following object(s) are masked from package:Rdbi :

	 dbAppendTable 

** help
Note: removing empty section \note
Note: removing empty section \references
Note: removing empty section \examples
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \seealso
Note: removing empty section \examples
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \seealso
Note: removing empty section \examples
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \seealso
Note: removing empty section \examples
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \examples
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \seealso
Note: removing empty section \examples
Note: removing empty section \references
Note: removing empty section \examples
Note: removing empty section \references
Note: removing empty section \examples
 >>> Building/Updating help pages for package 'pgUtils'
     Formats: text html latex example 
  AutoReference                     text    html    latex
  auto.fk.name                      text    html    latex
  auto.pk.name                      text    html    latex
  auto.pk.seq                       text    html    latex
  createDBTable                     text    html    latex   example
  createSequence                    text    html    latex
  dbColnames                        text    html    latex
  dbListDatabases                   text    html    latex
  dbListSequences                   text    html    latex
  deleteDBEntry                     text    html    latex
  do.log                            text    html    latex
  getRefAttribute-methods           text    html    latex
  getRefColumn-methods              text    html    latex
  getRefTable-methods               text    html    latex
  getSourceAttribute-methods        text    html    latex
  getSourceColumn-methods           text    html    latex
  insertIntoTable                   text    html    latex   example
  log.file                          text    html    latex
  log.level                         text    html    latex
  loggit                            text    html    latex
  searchIn                          text    html    latex
  updateDBTable                     text    html    latex
** building package indices ...
* DONE (pgUtils)