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Package 166/260HostnameOS / ArchBUILDCHECKBUILD BIN
ontoTools 1.16.0
Vince Carey
Snapshot Date: 2008-10-16 00:10:09 -0700 (Thu, 16 Oct 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/ontoTools
Last Changed Rev: 31430 / Revision: 34573
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64 [ OK ] OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: ontoTools
Version: 1.16.0
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD build ontoTools
StartedAt: 2008-10-16 02:01:25 -0700 (Thu, 16 Oct 2008)
EndedAt: 2008-10-16 02:03:37 -0700 (Thu, 16 Oct 2008)
EllapsedTime: 131.6 seconds
RetCode: 0
Status: OK
PackageFile: ontoTools_1.16.0.tar.gz
PackageFileSize: 3.311 MiB

Command output

* checking for file 'ontoTools/DESCRIPTION' ... OK
* preparing 'ontoTools':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'ontoTools' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: graph
Loading required package: SparseM
Package SparseM (0.78) loaded.  To cite, see citation("SparseM")
Loading required package: GO.db
Loading required package: AnnotationDbi
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: DBI
Loading required package: RSQLite
Loading required package: annotate
Loading required package: xtable
Creating a new generic function for "grep" in "ontoTools"
** help
Note: removing empty section \references
Note: removing empty section \value
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \value
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \details
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \source
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \examples
Note: removing empty section \references
 >>> Building/Updating help pages for package 'ontoTools'
     Formats: text html latex example 
  A.csr                             text    html    latex
  GDI                               text    html    latex   example
  LLGOMFcp                          text    html    latex
  OOC-class                         text    html    latex   example
  SGDIvocab                         text    html    latex   example
  STMA                              text    html    latex   example
  accessMat                         text    html    latex
  buildGOgraph                      text    html    latex   example
  compoundGraph-class               text    html    latex
  depthStruct                       text    html    latex   example
  gomfAmat                          text    html    latex
  litOnto                           text    html    latex
  namedSparse-class                 text    html    latex   example
  ontology-class                    text    html    latex   example
  ooMapLL2GOMFdemo                  text    html    latex
  otkvEnv2namedSparse               text    html    latex   example
  rootedDAG-class                   text    html    latex
  semsim                            text    html    latex   example
  taggedHierNomenclature-class      text    html    latex   example
  toDot-methods                     text    html    latex   example
** building package indices ...
* DONE (ontoTools)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'ontoTools_1.16.0.tar.gz'