* checking for file 'nem/DESCRIPTION' ... OK
* preparing 'nem':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'nem' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: e1071
Loading required package: class
Loading required package: graph
Loading required package: Rgraphviz
Loading required package: grid
Loading required package: RBGL
Attaching package: 'RBGL'
The following object(s) are masked from package:e1071 :
extractPath
Loading required package: time
Loading required package: cluster
Loading required package: bootstrap
** help
Note: removing empty section \seealso
Note: removing empty section \details
Note: removing empty section \note
Note: removing empty section \references
Note: removing empty section \seealso
>>> Building/Updating help pages for package 'nem'
Formats: text html latex example
BFSlevel text html latex example
BoutrosRNAi2002 text html latex example
FULLmLL text html latex example
SCCgraph text html latex example
enumerate.models text html latex example
getDensityMatrix text html latex
internal text html latex
local.model.prior text html latex example
mLL text html latex example
moduleNetwork text html latex example
nem text html latex example
nem.bootstrap text html latex example
nem.calcSignificance text html latex example
nem.cont.preprocess text html latex example
nem.discretize text html latex example
nem.greedy text html latex example
nem.jackknife text html latex example
nemModelSelection text html latex example
network.AIC text html latex example
pairwise.posterior text html latex example
plot.effects text html latex example
plot.nem text html latex
prune.graph text html latex example
score text html latex example
selectEGenes text html latex example
subsets text html latex example
transitive.closure text html latex example
transitive.reduction text html latex example
triples.posterior text html latex example
** building package indices ...
* DONE (nem)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'nem_2.4.0.tar.gz'