externalVector 1.6.0
Biocore Team c/o BioC user list
| Snapshot Date: 2008-10-16 00:10:09 -0700 (Thu, 16 Oct 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/externalVector | | Last Changed Rev: 31430 / Revision: 34573 | | Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/externalVector.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ISO8859-1
* checking for file 'externalVector/DESCRIPTION' ... OK
* this is package 'externalVector' version '1.6.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'externalVector' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating externalVector-Ex.R ... OK
* checking examples ... OK
* creating externalVector-manual.tex ... OK
* checking externalVector-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.2-bioc/meat/externalVector.Rcheck
---------- Making package externalVector ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making allocator.d from allocator.c
making arraySummary.d from arraySummary.c
making coerce.d from coerce.c
making externalVector.d from externalVector.c
making groups.d from groups.c
making math.d from math.c
making slice.d from slice.c
making storage.d from storage.c
making subscript.d from subscript.c
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c allocator.c -o allocator.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c arraySummary.c -o arraySummary.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c coerce.c -o coerce.o
coerce.c: In function 'ComplexFromString':
coerce.c:213: warning: initialization from incompatible pointer type
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c externalVector.c -o externalVector.o
externalVector.c:7: warning: 'ScalarVector' defined but not used
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c groups.c -o groups.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c math.c -o math.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c slice.c -o slice.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c storage.c -o storage.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c subscript.c -o subscript.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.2-bioc/R/include -i externalVector_res.rc -o externalVector_res.o
gcc -std=gnu99 -shared -s -o externalVector.dll externalVector.def allocator.o arraySummary.o coerce.o externalVector.o groups.o math.o slice.o storage.o subscript.o externalVector_res.o -Le:/biocbld/bbs-2.2-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
preparing package externalVector for lazy loading
Creating a new generic function for "match" in "externalVector"
Creating a new generic function for "as.vector" in "externalVector"
Creating a new generic function for "as.single" in "externalVector"
Creating a new generic function for "as.list" in "externalVector"
Creating a new generic function for "as.matrix" in "externalVector"
Creating a new generic function for "as.data.frame" in "externalVector"
Creating a new generic function for "colSums" in "externalVector"
Creating a new generic function for "colMeans" in "externalVector"
Creating a new generic function for "rowSums" in "externalVector"
Creating a new generic function for "rowMeans" in "externalVector"
Creating a new generic function for "apply" in "externalVector"
Creating a new generic function for "lapply" in "externalVector"
Creating a new generic function for "sapply" in "externalVector"
Creating a new generic function for "mean" in "externalVector"
Creating a new generic function for "median" in "externalVector"
New generic for "var" does not agree with implicit generic from package "stats"; a new generic will be assigned with package "externalVector"
New generic for "cov" does not agree with implicit generic from package "stats"; a new generic will be assigned with package "externalVector"
New generic for "cor" does not agree with implicit generic from package "stats"; a new generic will be assigned with package "externalVector"
Creating a new generic function for "cov2cor" in "externalVector"
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'externalVector'
Formats: text html latex example chm
NAIndex-class text html latex chm
SubscriptList text html latex example chm
Subset text html latex chm
allIndex-class text html latex chm
allNA text html latex example chm
allocators text html latex chm
as.Rvector text html latex example chm
asEach text html latex example chm
defaultElement text html latex example chm
exprMatrix-class text html latex chm
externalAllocator-class text html latex chm
externalMatrix text html latex example chm
externalResource-class text html latex chm
externalStorage-class text html latex chm
externalVector-class text html latex chm
externalVector text html latex example chm
externalVectorWithStorage-class text html latex chm
gcAllocator-class text html latex example chm
getExternalStorage text html latex chm
getNativeStorageMethods text html latex chm
indirectExternalMatrix-class text html latex chm
indirectExternalVector-class text html latex chm
internalType text html latex chm
makeSlice text html latex example chm
matrixIndex-class text html latex chm
nativeStorageMethods-class text html latex chm
nativeStorageMethodsList-class text html latex chm
nonSlotAttributes text html latex chm
noneIndex-class text html latex chm
positiveIndex-class text html latex chm
rebind text html latex chm
setDimNames text html latex chm
setExternalStorageClass text html latex example chm
setVirtualMethod text html latex example chm
simpleStorage-class text html latex chm
sliceIndex-class text html latex chm
union-class text html latex chm
var text html latex example chm
vectorIndex-class text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\externalVector.Rcheck\00_pkg_src\externalVector\chm\externalVector.chm
Compile time: 0 minutes, 1 second
40 Topics
504 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\externalVector.Rcheck\00_pkg_src\externalVector\chm\externalVector.chm, 83,533 bytes
Compression decreased file by 254,099 bytes.
adding MD5 sums
* DONE (externalVector)