annotationTools 1.10.0
Alexandre Kuhn
| Snapshot Date: 2008-10-16 00:10:09 -0700 (Thu, 16 Oct 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/annotationTools | | Last Changed Rev: 31430 / Revision: 34573 | | Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | [ OK ] | OK |
* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.2-bioc/meat/annotationTools.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ASCII
* checking for file 'annotationTools/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'annotationTools' version '1.10.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'annotationTools' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating annotationTools-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating annotationTools-manual.tex ... OK
* checking annotationTools-manual.tex using pdflatex ... OK
* Installing *source* package 'annotationTools' ...
** R
** data
** inst
** help
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>>> Building/Updating help pages for package 'annotationTools'
Formats: text html latex example
HG-U133_Plus_2_annot_part text html latex
HG-U133_Plus_2_ortholog_part text html latex
Mouse430_2_annot_part text html latex
annot_HGU133A text html latex
compactList text html latex example
getANNOTATION text html latex example
getGENEID text html latex example
getGENEONTOLOGY text html latex example
getGENESYMBOL text html latex example
getGENETITLE text html latex example
getHOMOLOG text html latex example
getMULTIANNOTATION text html latex example
getOrthologousProbesets text html latex example
getPROBESET text html latex example
homologene_part text html latex
listToCharacterVector text html latex example
ortho text html latex
ps2ps text html latex example
table_human text html latex
table_mouse text html latex
** building package indices ...
* DONE (annotationTools)