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Package 250/260HostnameOS / ArchBUILDCHECKBUILD BIN
VanillaICE 1.2.0
Robert Scharpf
Snapshot Date: 2008-10-16 00:10:09 -0700 (Thu, 16 Oct 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/VanillaICE
Last Changed Rev: 31430 / Revision: 34573
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK [ OK ]
Package: VanillaICE
Version: 1.2.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh VanillaICE_1.2.0.tar.gz /Library/Frameworks/R.framework/Versions/2.7/Resources/bin/R VanillaICE.buildbin-libdir
StartedAt: 2008-10-16 07:07:49 -0700 (Thu, 16 Oct 2008)
EndedAt: 2008-10-16 07:07:58 -0700 (Thu, 16 Oct 2008)
EllapsedTime: 9.6 seconds
RetCode: 0
Status: OK
PackageFile: VanillaICE_1.2.0.tgz
PackageFileSize: 1.723 MiB

Command output

                INSTALLATION WITH 'R CMD INSTALL VanillaICE_1.2.0.tar.gz'

* Installing to library 'VanillaICE.buildbin-libdir'
* Installing *source* package 'VanillaICE' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: SNPchip
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: oligoClasses
** help
 >>> Building/Updating help pages for package 'VanillaICE'
     Formats: text html latex example 
  HmmOptions-class                  text    html    latex   example
  HmmOptions-methods                text    html    latex
  HmmParameter-class                text    html    latex   example
  HmmPredict-class                  text    html    latex   example
  addFeatureData                    text    html    latex
  calculateBreakpoints              text    html    latex
  calculateCnSE                     text    html    latex
  calculateDistance                 text    html    latex
  calls.ICE                         text    html    latex
  calls.emission                    text    html    latex
  chromosome1                       text    html    latex   example
  copyNumber.ICE                    text    html    latex
  copyNumber.emission               text    html    latex
  emission                          text    html    latex
  fit                               text    html    latex   example
  genomicDistance                   text    html    latex
  getChromosomeArm                  text    html    latex
  hmm                               text    html    latex   example
  makeTable                         text    html    latex   example
  pi                                text    html    latex
  scaleTransitionProbability        text    html    latex   example
  states                            text    html    latex
  transitionScale                   text    html    latex
  viterbi                           text    html    latex
** building package indices ...
* DONE (VanillaICE)