Package: RSNPper

Version: 1.14.0

Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD check RSNPper_1.14.0.tar.gz

StartedAt: 2008-10-16 06:01:26 -0700 (Thu, 16 Oct 2008)

EndedAt: 2008-10-16 06:02:46 -0700 (Thu, 16 Oct 2008)

EllapsedTime: 80.6 seconds

RetCode: 0

Status: OK

CheckDir: RSNPper.Rcheck

Warnings: 0

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.2-bioc/meat/RSNPper.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ISO8859-1
* checking for file 'RSNPper/DESCRIPTION' ... OK
* this is package 'RSNPper' version '1.14.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'RSNPper' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating RSNPper-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... NOTE
--- running texi2dvi on vignettes
/usr/bin/texi2dvi: pdflatex exited with bad status, quitting.
Error in texi2dvi(file = bft, pdf = TRUE, clean = FALSE, quiet = TRUE) : 
  running 'texi2dvi' on 'RSNPper.tex' failed
Calls: checkVignettes -> texi2dvi
Execution halted
* creating RSNPper-manual.tex ... OK
* checking RSNPper-manual.tex using pdflatex ... OK

* Installing *source* package 'RSNPper' ...
** R
** inst
** help
 >>> Building/Updating help pages for package 'RSNPper'
     Formats: text html latex example 
  SNPperMeta-class                  text    html    latex   example
  geneInfo                          text    html    latex   example
** building package indices ...
* DONE (RSNPper)