topGO 1.5.0
Adrian Alexa
| Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/topGO | | Last Changed Rev: 30198 / Revision: 30951 | | Last Changed Date: 2008-02-26 10:37:53 -0800 (Tue, 26 Feb 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | WARNINGS | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | WARNINGS | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | WARNINGS | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | WARNINGS | OK |
| pelham | Mac OS X Leopard (10.5.1) / i386 | [ OK ] | WARNINGS | OK |
* checking for file 'topGO/DESCRIPTION' ... OK
* preparing 'topGO':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'topGO' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: graph
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: GO
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: SparseM
Package SparseM (0.77) loaded. To cite, see citation("SparseM")
Creating a new generic function for "print" in "topGO"
** help
Note: removing empty section \details
Note: removing empty section \value
Note: removing empty section \description
Note: removing empty section \seealso
Note: removing empty section \examples
Note: removing empty section \section{Methods}
>>> Building/Updating help pages for package 'topGO'
Formats: text html latex example
GOFisherTest text html latex
GOKSTest text html latex
GOdata text html latex example
annFUN.hgu text html latex example
buildGOgraph.topology text html latex
buildLevels text html latex example
classicCount-class text html latex example
classicScore-class text html latex example
elimCount-class text html latex example
elimScore-class text html latex example
getPvalues text html latex example
getSigGroups text html latex example
groupGOTerms text html latex
groupStats-class text html latex example
inducedGraph text html latex example
mapGenes2GOgraph text html latex example
printGenes-methods text html latex
printGraph-methods text html latex example
reverseArch text html latex example
topGO-package text html latex
topGOdata-class text html latex example
topGOresult-class text html latex
weightCount-class text html latex example
weightScore-class text html latex
** building package indices ...
* DONE (topGO)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'topGO_1.5.0.tar.gz'