sscore 1.11.0
Richard Kennedy
| Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/sscore | | Last Changed Rev: 30639 / Revision: 30951 | | Last Changed Date: 2008-03-24 10:46:05 -0700 (Mon, 24 Mar 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pelham | Mac OS X Leopard (10.5.1) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/sscore.Rcheck'
* using R version 2.7.0 Under development (unstable) (2008-03-10 r44730)
* using session charset: ISO8859-1
* checking for file 'sscore/DESCRIPTION' ... OK
* this is package 'sscore' version '1.11.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'sscore' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
computeAffxSFandSDT: no visible binding for global variable 'logI'
computeSFandSDT: no visible binding for global variable 'logI'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating sscore-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating sscore-manual.tex ... OK
* checking sscore-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.2-bioc/meat/sscore.Rcheck
---------- Making package sscore ------------
adding build stamp to DESCRIPTION
installing R files
installing inst files
preparing package sscore for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affyio
Loading required package: preprocessCore
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'sscore'
Formats: text html latex example chm
OneStepBiweightAlgorithm text html latex chm
SScore text html latex example chm
SScoreBatch text html latex example chm
computeAffxRawQ text html latex chm
computeAffxSFandSDT text html latex example chm
computeOutlier text html latex example chm
computeRawQ text html latex chm
computeSFandSDT text html latex example chm
computeZoneIInfo text html latex chm
computeZonenoise text html latex chm
trimMean text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\sscore.Rcheck\00_pkg_src\sscore\chm\sscore.chm
Compile time: 0 minutes, 0 seconds
12 Topics
28 Local links
16 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\sscore.Rcheck\00_pkg_src\sscore\chm\sscore.chm, 28,771 bytes
Compression decreased file by 17,742 bytes.
adding MD5 sums
* DONE (sscore)