pathRender 1.7.4
Li Long
| Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/pathRender | | Last Changed Rev: 30285 / Revision: 30951 | | Last Changed Date: 2008-02-29 03:24:16 -0800 (Fri, 29 Feb 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ WARNINGS ] | OK |
| pelham | Mac OS X Leopard (10.5.1) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/pathRender.Rcheck'
* using R version 2.7.0 Under development (unstable) (2008-03-10 r44730)
* using session charset: ISO8859-1
* checking for file 'pathRender/DESCRIPTION' ... OK
* this is package 'pathRender' version '1.7.4'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'pathRender' can be installed ... WARNING
Found the following significant warnings:
missing link(s): graphNEL-class graph-class
See 'E:/biocbld/bbs-2.2-bioc/meat/pathRender.Rcheck/00install.out' for details.
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating pathRender-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating pathRender-manual.tex ... OK
* checking pathRender-manual.tex using pdflatex ... OK
WARNING: There was 1 warning, see
E:/biocbld/bbs-2.2-bioc/meat/pathRender.Rcheck/00check.log
for details
installing R.css in E:/biocbld/bbs-2.2-bioc/meat/pathRender.Rcheck
---------- Making package pathRender ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
preparing package pathRender for lazy loading
Loading required package: graph
Loading required package: Rgraphviz
Loading required package: grid
Loading required package: RColorBrewer
Loading required package: cMAP
Loading required package: AnnotationDbi
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: DBI
Loading required package: RSQLite
installing man source files
installing indices
installing help
Note: removing empty section \seealso
Note: removing empty section \seealso
>>> Building/Updating help pages for package 'pathRender'
Formats: text html latex example chm
colorNodes text html latex example chm
coloredGraph-class text html latex example chm
missing link(s): graphNEL-class graph-class
graphcMAP text html latex example chm
plotExGraph text html latex example chm
pwayGraph-class text html latex example chm
reduceES text html latex example chm
rendercMAP text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\pathRender.Rcheck\00_pkg_src\pathRender\chm\pathRender.chm
Compile time: 0 minutes, 0 seconds
8 Topics
18 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\pathRender.Rcheck\00_pkg_src\pathRender\chm\pathRender.chm, 23,309 bytes
Compression decreased file by 2,021 bytes.
adding MD5 sums
* DONE (pathRender)