yeastRNASeq 0.2.0
J. Bullard
| Snapshot Date: 2014-10-04 07:15:22 -0700 (Sat, 04 Oct 2014) | | URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_2_14/experiment/pkgs/yeastRNASeq | | Last Changed Rev: 2799 / Revision: 3055 | | Last Changed Date: 2014-04-11 14:27:08 -0700 (Fri, 11 Apr 2014) |
| zin2 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | NotNeeded | OK | WARNINGS | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | [ WARNINGS ] | OK |
| petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | OK | WARNINGS | OK |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf yeastRNASeq.buildbin-libdir && mkdir yeastRNASeq.buildbin-libdir && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=yeastRNASeq.buildbin-libdir yeastRNASeq_0.2.0.tar.gz >yeastRNASeq-install.out 2>&1 && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD check --library=yeastRNASeq.buildbin-libdir --install="check:yeastRNASeq-install.out" --force-multiarch --no-vignettes --timings yeastRNASeq_0.2.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory 'E:/biocbld/bbs-2.14-data-experiment/meat/yeastRNASeq.Rcheck'
* using R version 3.1.1 (2014-07-10)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'yeastRNASeq/DESCRIPTION' ... OK
* this is package 'yeastRNASeq' version '0.2.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'yeastRNASeq' can be installed ... OK
* checking installed package size ... NOTE
installed size is 313.7Mb
sub-directories of 1Mb or more:
data 62.7Mb
reads 250.8Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
geneLevelData.rda 68Kb 43Kb bzip2
yeastAligned.rda 62.6Mb 44.4Mb xz
yeastAnno.rda 80Kb 57Kb xz
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There was 1 note.
See
'E:/biocbld/bbs-2.14-data-experiment/meat/yeastRNASeq.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'yeastRNASeq' ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'yeastRNASeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'yeastRNASeq' as yeastRNASeq_0.2.0.zip
* DONE (yeastRNASeq)