BioC experimental data: CHECK report for beta7 on moscato2

Package: beta7

Version: 1.2.0

Command: rm -rf beta7.buildbin-libdir && mkdir beta7.buildbin-libdir && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=beta7.buildbin-libdir beta7_1.2.0.tar.gz >beta7-install.out 2>&1 && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD check --library=beta7.buildbin-libdir --install="check:beta7-install.out" --force-multiarch --no-vignettes --timings beta7_1.2.0.tar.gz

StartedAt: 2014-10-04 09:06:25 -0700 (Sat, 04 Oct 2014)

EndedAt: 2014-10-04 09:08:34 -0700 (Sat, 04 Oct 2014)

EllapsedTime: 129.6 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: beta7.Rcheck

Warnings: 2

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### Running command:
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###   rm -rf beta7.buildbin-libdir && mkdir beta7.buildbin-libdir && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=beta7.buildbin-libdir beta7_1.2.0.tar.gz >beta7-install.out 2>&1 && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD check --library=beta7.buildbin-libdir --install="check:beta7-install.out" --force-multiarch --no-vignettes --timings beta7_1.2.0.tar.gz
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* using log directory 'E:/biocbld/bbs-2.14-data-experiment/meat/beta7.Rcheck'
* using R version 3.1.1 (2014-07-10)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'beta7/DESCRIPTION' ... OK
* this is package 'beta7' version '1.2.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'beta7' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 37.2Mb
  sub-directories of 1Mb or more:
    beta7  35.7Mb
    data    1.5Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... WARNING
Subdirectory 'data' contains no data sets.
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... WARNING
Files not of a type allowed in a 'data' directory:
  'Rdata.rdb' 'Rdata.rds' 'Rdata.rdx'
Please use e.g. 'inst/extdata' for non-R data files
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... [2s] OK
** running examples for arch 'x64' ... [2s] OK
* checking PDF version of manual ... OK

WARNING: There were 2 warnings.
NOTE: There was 1 note.
See
  'E:/biocbld/bbs-2.14-data-experiment/meat/beta7.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'beta7' ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'beta7' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'beta7' as beta7_1.2.0.zip
* DONE (beta7)

name	user	system	elapsed
beta7	0.88	0.03	0.91

name	user	system	elapsed
beta7	0.94	0.06	1.30