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BioC 2.14: INSTALL report for wateRmelon on moscato2

This page was generated on 2014-10-08 08:55:10 -0700 (Wed, 08 Oct 2014).

Package 813/824HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
wateRmelon 1.4.0
Leo
Snapshot Date: 2014-10-07 17:20:37 -0700 (Tue, 07 Oct 2014)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_14/madman/Rpacks/wateRmelon
Last Changed Rev: 88838 / Revision: 95116
Last Changed Date: 2014-04-11 14:07:21 -0700 (Fri, 11 Apr 2014)
zin2 Linux (Ubuntu 12.04.4 LTS) / x86_64  OK  OK  WARNINGS 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ OK ] OK  WARNINGS  OK 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  WARNINGS  OK 
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK 

Summary

Package: wateRmelon
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O http://zin2/BBS/2.14/bioc/src/contrib/wateRmelon_1.4.0.tar.gz && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch wateRmelon_1.4.0.tar.gz && rm wateRmelon_1.4.0.tar.gz
StartedAt: 2014-10-07 18:53:46 -0700 (Tue, 07 Oct 2014)
EndedAt: 2014-10-07 18:55:00 -0700 (Tue, 07 Oct 2014)
EllapsedTime: 73.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://zin2/BBS/2.14/bioc/src/contrib/wateRmelon_1.4.0.tar.gz && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch wateRmelon_1.4.0.tar.gz && rm wateRmelon_1.4.0.tar.gz
###
##############################################################################
##############################################################################




install for i386

* installing to library 'E:/biocbld/bbs-2.14-bioc/R/library'
* installing *source* package 'wateRmelon' ...
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import by 'graphics::image' when loading 'methylumi'
Warning: 'IlluminaHumanMethylation450k.db' is deprecated.
Use 'FDb.InfiniumMethylation.hg19' instead.
Use 'FDb.InfiniumMethylation.hg18' instead.
Use 'mapToGenome() function in minfi or methylumi' instead.
See help("Deprecated")
in method for 'betaqn' with signature 'bn="exprmethy450"': no definition for class "exprmethy450"
in method for 'fuks' with signature 'data="exprmethy450"': no definition for class "exprmethy450"
in method for 'genki' with signature 'bn="exprmethy450"': no definition for class "exprmethy450"
in method for 'dmrse' with signature 'betas="exprmethy450"': no definition for class "exprmethy450"
in method for 'dmrse_row' with signature 'betas="exprmethy450"': no definition for class "exprmethy450"
in method for 'dmrse_col' with signature 'betas="exprmethy450"': no definition for class "exprmethy450"
in method for 'seabi' with signature 'bn="exprmethy450"': no definition for class "exprmethy450"
** help
*** installing help indices
** building package indices
** installing vignettes
   'wateRmelon.Rnw' 
** testing if installed package can be loaded
Warning: replacing previous import by 'graphics::image' when loading 'methylumi'
Warning: 'IlluminaHumanMethylation450k.db' is deprecated.
Use 'FDb.InfiniumMethylation.hg19' instead.
Use 'FDb.InfiniumMethylation.hg18' instead.
Use 'mapToGenome() function in minfi or methylumi' instead.
See help("Deprecated")

install for x64

* installing to library 'E:/biocbld/bbs-2.14-bioc/R/library'
* installing *source* package 'wateRmelon' ...
** testing if installed package can be loaded
Warning: replacing previous import by 'graphics::image' when loading 'methylumi'
Warning: 'IlluminaHumanMethylation450k.db' is deprecated.
Use 'FDb.InfiniumMethylation.hg19' instead.
Use 'FDb.InfiniumMethylation.hg18' instead.
Use 'mapToGenome() function in minfi or methylumi' instead.
See help("Deprecated")
* DONE (wateRmelon)