VanillaICE 1.26.1
Robert Scharpf
| Snapshot Date: 2014-10-07 17:20:37 -0700 (Tue, 07 Oct 2014) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_14/madman/Rpacks/VanillaICE | | Last Changed Rev: 90597 / Revision: 95116 | | Last Changed Date: 2014-05-21 11:11:29 -0700 (Wed, 21 May 2014) |
| zin2 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | OK | OK | OK | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK | OK |
| petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | OK | OK |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | [ OK ] | OK | OK | OK |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL VanillaICE
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/3.1/Resources/library’
* installing *source* package ‘VanillaICE’ ...
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -fPIC -Wall -mtune=core2 -g -O2 -c rinit.c -o rinit.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -fPIC -Wall -mtune=core2 -g -O2 -c viterbi.c -o viterbi.o
viterbi.c:108:34: warning: unused variable 'tp' [-Wunused-variable]
double *pDeltaTempSum, Pstar, *tp;
^
viterbi.c:244:27: warning: '/*' within block comment [-Wcomment]
/* double *pDelta, /* for viterbi */
^
viterbi.c:257:3: warning: '/*' within block comment [-Wcomment]
/* *************************************************************************** */
^
viterbi.c:260:34: warning: unused variable 'tp' [-Wunused-variable]
double *pDeltaTempSum, Pstar, *tp;
^
viterbi.c:262:13: warning: unused variable 'tt' [-Wunused-variable]
int i,j,t,tt;
^
5 warnings generated.
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o VanillaICE.so rinit.o viterbi.o -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.1/Resources/library/VanillaICE/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
‘VanillaICE.Rnw’
‘crlmmDownstream.Rnw’
** testing if installed package can be loaded
* DONE (VanillaICE)