BioC experimental data: CHECK report for waveTilingData on zin1

Package: waveTilingData

Version: 0.99.3

Command: /home/biocbuild/bbs-2.13-bioc/R/bin/R CMD check --no-vignettes --timings waveTilingData_0.99.3.tar.gz

StartedAt: 2014-04-04 09:49:55 -0700 (Fri, 04 Apr 2014)

EndedAt: 2014-04-04 09:53:06 -0700 (Fri, 04 Apr 2014)

EllapsedTime: 190.8 seconds

RetCode: 0

Status:  OK

CheckDir: waveTilingData.Rcheck

Warnings: 0

* using log directory ‘/home/biocbuild/bbs-2.13-data-experiment/meat/waveTilingData.Rcheck’
* using R version 3.0.3 (2014-03-06)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘waveTilingData/DESCRIPTION’ ... OK
* this is package ‘waveTilingData’ version ‘0.99.3’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘waveTilingData’ can be installed ... [1s/3s] OK
* checking installed package size ... NOTE
  installed size is 240.9Mb
  sub-directories of 1Mb or more:
    data  240.8Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... NOTE
  No methods found in "IRanges" for requests: subseq
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [72s/74s] OK
Examples with CPU or elapsed time > 5s
                           user system elapsed
leafdev                  39.114  0.716  41.247
leafdevBQ                20.081  0.512  21.000
leafdevMapAndFilterTAIR9  8.997  0.116   9.262
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  ‘/home/biocbuild/bbs-2.13-data-experiment/meat/waveTilingData.Rcheck/00check.log’
for details.

* installing *source* package ‘waveTilingData’ ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (waveTilingData)

name	user	system	elapsed
leafdev	39.114	0.716	41.247
leafdevBQ	20.081	0.512	21.000
leafdevFit	0.856	0.040	0.927
leafdevInfCompare	0.876	0.020	0.911
leafdevMapAndFilterTAIR9	8.997	0.116	9.262