BioC experimental data: CHECK report for ChAMPdata on moscato1

Package: ChAMPdata

Version: 0.99.6

Command: rm -rf ChAMPdata.buildbin-libdir && mkdir ChAMPdata.buildbin-libdir && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=ChAMPdata.buildbin-libdir ChAMPdata_0.99.6.tar.gz >ChAMPdata-install.out 2>&1 && D:\biocbld\bbs-2.13-bioc\R\bin\R.exe CMD check --library=ChAMPdata.buildbin-libdir --install="check:ChAMPdata-install.out" --force-multiarch --no-vignettes --timings ChAMPdata_0.99.6.tar.gz && mv ChAMPdata.buildbin-libdir/* ChAMPdata.Rcheck/ && rmdir ChAMPdata.buildbin-libdir

StartedAt: 2014-04-04 11:13:42 -0700 (Fri, 04 Apr 2014)

EndedAt: 2014-04-04 11:18:58 -0700 (Fri, 04 Apr 2014)

EllapsedTime: 315.8 seconds

RetCode: 0

Status:  OK

CheckDir: ChAMPdata.Rcheck

Warnings: 0

* using log directory 'D:/biocbld/bbs-2.13-data-experiment/meat/ChAMPdata.Rcheck'
* using R version 3.0.3 (2014-03-06)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ChAMPdata/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'ChAMPdata' version '0.99.6'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'ChAMPdata' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 190.7Mb
  sub-directories of 1Mb or more:
    data      67.0Mb
    extdata  123.6Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... [37s] OK
Examples with CPU or elapsed time > 5s
                   user system elapsed
ChAMPdata-package 20.37   0.16   20.53
testDataSet       12.61   0.14   12.75
** running examples for arch 'x64' ... [36s] OK
Examples with CPU or elapsed time > 5s
                   user system elapsed
ChAMPdata-package 20.23   0.23   20.47
testDataSet       12.11   0.07   12.17
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  'D:/biocbld/bbs-2.13-data-experiment/meat/ChAMPdata.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'ChAMPdata' ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'ChAMPdata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ChAMPdata' as ChAMPdata_0.99.6.zip
* DONE (ChAMPdata)

name	user	system	elapsed
ChAMPdata-package	20.37	0.16	20.53
probe.features	2.56	0.04	2.60
probeInfoALL.lv	0.61	0.02	0.63
testDataSet	12.61	0.14	12.75

name	user	system	elapsed
ChAMPdata-package	20.23	0.23	20.47
probe.features	2.34	0.09	2.43
probeInfoALL.lv	0.53	0.03	0.56
testDataSet	12.11	0.07	12.17