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This page was generated on 2014-04-05 09:52:37 -0700 (Sat, 05 Apr 2014).
Package 1/750 | Hostname | OS / Arch | BUILD | CHECK | BUILD BIN | ||||
a4 1.10.0 Tobias Verbeke
| zin1 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | OK | OK | |||||
moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK | |||||
perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | [ OK ] | OK |
Package: a4 |
Version: 1.10.0 |
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch a4_1.10.0.tar.gz |
StartedAt: 2014-04-04 23:07:34 -0700 (Fri, 04 Apr 2014) |
EndedAt: 2014-04-04 23:11:05 -0700 (Fri, 04 Apr 2014) |
EllapsedTime: 210.7 seconds |
RetCode: 0 |
Status: OK |
CheckDir: a4.Rcheck |
Warnings: 0 |
* using log directory ‘/Users/biocbuild/bbs-2.13-bioc/meat/a4.Rcheck’ * using R version 3.0.3 (2014-03-06) * using platform: x86_64-apple-darwin10.8.0 (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘a4/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘a4’ version ‘1.10.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘a4’ can be installed ... [33s/34s] OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... NOTE Packages in Depends field not imported from: ‘a4Base’ ‘a4Classif’ ‘a4Core’ ‘a4Preproc’ ‘a4Reporting’ These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. See the information on DESCRIPTION files in the chapter ‘Creating R packages’ of the ‘Writing R Extensions’ manual. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking for missing documentation entries ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking for old-style vignette sources ... NOTE Vignette sources only in ‘inst/doc’: ‘a4vignette.Rnw’ A ‘vignettes’ directory will be required as from R 3.1.0 * checking examples ... NONE * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK NOTE: There were 2 notes. See ‘/Users/biocbuild/bbs-2.13-bioc/meat/a4.Rcheck/00check.log’ for details.
a4.Rcheck/00install.out:
* installing *source* package ‘a4’ ... ** R ** inst ** preparing package for lazy loading ** help No man pages found in package ‘a4’ *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (a4)