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BioC 2.12: BUILD BIN report for limma on moscato2

This page was generated on 2013-10-09 09:38:04 -0700 (Wed, 09 Oct 2013).

Package 364/671HostnameOS / ArchBUILDCHECKBUILD BIN
limma 3.16.8
Gordon Smyth
Snapshot Date: 2013-10-08 17:00:48 -0700 (Tue, 08 Oct 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/limma
Last Changed Rev: 80568 / Revision: 81334
Last Changed Date: 2013-09-18 16:47:35 -0700 (Wed, 18 Sep 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK 

Summary

Package: limma
Version: 3.16.8
Command: rm -rf limma.buildbin-libdir && mkdir limma.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=limma.buildbin-libdir limma_3.16.8.tar.gz
StartedAt: 2013-10-09 05:14:01 -0700 (Wed, 09 Oct 2013)
EndedAt: 2013-10-09 05:15:00 -0700 (Wed, 09 Oct 2013)
EllapsedTime: 59.1 seconds
RetCode: 0
Status:  OK  
PackageFile: limma_3.16.8.zip
PackageFileSize: 1.515 MiB

Command output


install for i386

* installing *source* package 'limma' ...
** libs
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c normexp.c -o normexp.o
normexp.c: In function 'normexp_m2loglik_saddle':
normexp.c:49:10: warning: variable 'maxDeviation' set but not used [-Wunused-but-set-variable]
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -m32 -shared -s -static-libgcc -o limma.dll tmp.def normexp.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/limma.buildbin-libdir/limma/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'limma' ...
** libs
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c normexp.c -o normexp.o
normexp.c: In function 'normexp_m2loglik_saddle':
normexp.c:49:10: warning: variable 'maxDeviation' set but not used [-Wunused-but-set-variable]
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -m64 -shared -s -static-libgcc -o limma.dll tmp.def normexp.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/limma.buildbin-libdir/limma/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'limma' as limma_3.16.8.zip
* DONE (limma)