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Package 530/671HostnameOS / ArchBUILDCHECKBUILD BIN
RCytoscape 1.10.0
Paul Shannon
Snapshot Date: 2013-04-30 17:01:37 -0700 (Tue, 30 Apr 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/RCytoscape
Last Changed Rev: 75263 / Revision: 76155
Last Changed Date: 2013-04-03 14:32:27 -0700 (Wed, 03 Apr 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK 
pelham Mac OS X Snow Leopard (10.6.8) / x86_64 [ ERROR ] skipped  skipped 

Summary

Package: RCytoscape
Version: 1.10.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RCytoscape
StartedAt: 2013-04-30 23:03:56 -0700 (Tue, 30 Apr 2013)
EndedAt: 2013-04-30 23:04:14 -0700 (Tue, 30 Apr 2013)
EllapsedTime: 17.8 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'RCytoscape/DESCRIPTION' ... OK
* preparing 'RCytoscape':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: graph
Loading required package: XMLRPC
Warning in .simpleDuplicateClass(def, prev) :
  the specification for S3 class "AsIs" in package 'XMLRPC' seems equivalent to one from package 'BiocGenerics' and is not turning on duplicate class definitions for this class

Error: processing vignette 'RCytoscape.Rnw' failed with diagnostics:
 chunk 1 (label = g0) 
Error in function (type, msg, asError = TRUE)  : couldn't connect to host
Execution halted