IPPD 1.8.0
Martin Slawski
| Snapshot Date: 2013-04-30 17:01:37 -0700 (Tue, 30 Apr 2013) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/IPPD | | Last Changed Rev: 75263 / Revision: 76155 | | Last Changed Date: 2013-04-03 14:32:27 -0700 (Wed, 03 Apr 2013) |
| george2 | Linux (Ubuntu 12.04.1 LTS) / x86_64 | OK | OK | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK |
| petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | OK |
| pelham | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | [ OK ] |
>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=IPPD.buildbin-libdir IPPD_1.8.0.tar.gz'
>>>>>>>
* installing *source* package 'IPPD' ...
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -fPIC -mtune=native -g -O2 -Wall -pedantic -Wconversion -c R_init_IPPD.c -o R_init_IPPD.o
In file included from R_init_IPPD.c:12:
./localquantile.h:24:52: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
double *temp = Calloc(sizeof(double) * ((*window)-1), double);
˜ ˜˜˜˜˜˜˜˜˜^˜
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:62:54: note: expanded from macro 'Calloc'
#define Calloc(n, t) (t *) R_chk_calloc( (size_t) (n), sizeof(t) )
^
In file included from R_init_IPPD.c:12:
./localquantile.h:25:51: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
int *tempindex = Calloc(sizeof(int) * ((*window)-1), int);
˜ ˜˜˜˜˜˜˜˜˜^˜
/Library/Frameworks/R.framework/Resources/include/R_ext/RS.h:62:54: note: expanded from macro 'Calloc'
#define Calloc(n, t) (t *) R_chk_calloc( (size_t) (n), sizeof(t) )
^
R_init_IPPD.c:28:3: warning: suggest braces around initialization of subobject [-Wmissing-braces]
NULL
^˜˜˜
{ }
/usr/bin/../lib/clang/3.2/include/stddef.h:52:16: note: expanded from macro 'NULL'
# define NULL ((void*)0)
^˜˜˜˜˜˜˜˜˜
3 warnings generated.
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -L/usr/local/lib -o IPPD.so R_init_IPPD.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.12-bioc/meat/IPPD.buildbin-libdir/IPPD/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (IPPD)
>>>>>>>
>>>>>>> FIXING LINKS FOR IPPD.buildbin-libdir/IPPD/libs//IPPD.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libgcc_s.1.dylib" "IPPD.buildbin-libdir/IPPD/libs//IPPD.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libgfortran.2.dylib" "IPPD.buildbin-libdir/IPPD/libs//IPPD.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libreadline.5.2.dylib" "IPPD.buildbin-libdir/IPPD/libs//IPPD.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libreadline.dylib" "IPPD.buildbin-libdir/IPPD/libs//IPPD.so"