Package: gaga

Version: 2.5.4

Command: rm -rf gaga.buildbin-libdir && mkdir gaga.buildbin-libdir && /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL --build --no-multiarch --library=gaga.buildbin-libdir gaga_2.5.4.tar.gz

StartedAt: 2013-03-24 11:39:51 -0700 (Sun, 24 Mar 2013)

EndedAt: 2013-03-24 11:40:10 -0700 (Sun, 24 Mar 2013)

EllapsedTime: 18.9 seconds

RetCode: 0

Status:  OK

PackageFile: gaga_2.5.4.tgz

PackageFileSize: 481.3 KiB

* installing *source* package 'gaga' ...
** libs
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c cseqdesma.c -o cseqdesma.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2  -c cstat.c -o cstat.o
cstat.c: In function 'scanFloat':
cstat.c:494: warning: format not a string literal and no format arguments
cstat.c: In function 'scanDouble':
cstat.c:502: warning: format not a string literal and no format arguments
cstat.c: In function 'fscanDouble':
cstat.c:510: warning: format not a string literal and no format arguments
cstat.c: In function 'scanInt':
cstat.c:520: warning: format not a string literal and no format arguments
cstat.c: In function 'fscanInt':
cstat.c:530: warning: format not a string literal and no format arguments
cstat.c: In function 'scanLong':
cstat.c:541: warning: format not a string literal and no format arguments
cstat.c: In function 'scanArray':
cstat.c:558: warning: format not a string literal and no format arguments
cstat.c: In function 'scanDoubleArray':
cstat.c:570: warning: format not a string literal and no format arguments
cstat.c: In function 'scanDoubleMatrix':
cstat.c:606: warning: format not a string literal and no format arguments
cstat.c: In function 'scanIntArray':
cstat.c:631: warning: format not a string literal and no format arguments
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o gaga.so cseqdesma.o cstat.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.12-bioc/meat/gaga.buildbin-libdir/gaga/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'gagamanual.Rnw' 
** testing if installed package can be loaded
packaged installation of 'gaga' as 'gaga_2.5.4.tgz'
* DONE (gaga)