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Package 266/658HostnameOS / ArchBUILDCHECKBUILD BIN
GenomicRanges 1.11.40
Bioconductor Package Maintainer
Snapshot Date: 2013-03-23 17:02:20 -0700 (Sat, 23 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GenomicRanges
Last Changed Rev: 74675 / Revision: 74756
Last Changed Date: 2013-03-22 07:39:46 -0700 (Fri, 22 Mar 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  WARNINGS 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 
pelham Mac OS X Snow Leopard (10.6.8) / x86_64  OK  WARNINGS [ OK ]

Summary

Package: GenomicRanges
Version: 1.11.40
Command: rm -rf GenomicRanges.buildbin-libdir && mkdir GenomicRanges.buildbin-libdir && /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL --build --no-multiarch --library=GenomicRanges.buildbin-libdir GenomicRanges_1.11.40.tar.gz
StartedAt: 2013-03-24 11:42:22 -0700 (Sun, 24 Mar 2013)
EndedAt: 2013-03-24 11:42:46 -0700 (Sun, 24 Mar 2013)
EllapsedTime: 23.8 seconds
RetCode: 0
Status:  OK 
PackageFile: GenomicRanges_1.11.40.tgz
PackageFileSize: 3.133 MiB

Command output

* installing *source* package 'GenomicRanges' ...
** libs
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.0/Resources/library/IRanges/include"   -fPIC  -mtune=core2 -g -O2  -c IRanges_stubs.c -o IRanges_stubs.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.0/Resources/library/IRanges/include"   -fPIC  -mtune=core2 -g -O2  -c R_init_GenomicRanges.c -o R_init_GenomicRanges.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.0/Resources/library/IRanges/include"   -fPIC  -mtune=core2 -g -O2  -c cigar_utils.c -o cigar_utils.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.0/Resources/library/IRanges/include"   -fPIC  -mtune=core2 -g -O2  -c transcript_utils.c -o transcript_utils.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o GenomicRanges.so IRanges_stubs.o R_init_GenomicRanges.o cigar_utils.o transcript_utils.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.12-bioc/meat/GenomicRanges.buildbin-libdir/GenomicRanges/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'GenomicRangesIntroduction.Rnw' 
   'GenomicRangesUseCases.Rnw' 
   'OverlapEncodings.Rnw' 
   'summarizeOverlaps.Rnw' 
** testing if installed package can be loaded
packaged installation of 'GenomicRanges' as 'GenomicRanges_1.11.40.tgz'
* DONE (GenomicRanges)