impute 1.31.1
Balasubramanian Narasimhan
| Snapshot Date: 2012-06-20 15:22:40 -0700 (Wed, 20 Jun 2012) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/impute | | Last Changed Rev: 66498 / Revision: 66885 | | Last Changed Date: 2012-06-07 10:53:29 -0700 (Thu, 07 Jun 2012) |
| lamb1 | Linux (openSUSE 12.1) / x86_64 | OK | OK | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Leopard (10.5.8) / i386 | OK | OK | [ OK ] |
| perceval | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=impute.buildbin-libdir impute_1.31.1.tar.gz'
>>>>>>>
* installing *source* package 'impute' ...
** libs
*** arch - i386
gfortran -arch i386 -fPIC -g -O2 -Wall -pedantic -c knnimpute.f -o knnimpute.o
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knnimpute.f: In function 'twomis':
knnimpute.f:132: warning: 'dold' may be used uninitialized in this function
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o impute.so knnimpute.o -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.11-bioc/meat/impute.buildbin-libdir/impute/libs/i386
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (impute)
>>>>>>>
>>>>>>> FIXING LINKS FOR impute.buildbin-libdir/impute/libs/i386/impute.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgcc_s.1.dylib" "impute.buildbin-libdir/impute/libs/i386/impute.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgfortran.2.dylib" "impute.buildbin-libdir/impute/libs/i386/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.5.2.dylib" "impute.buildbin-libdir/impute/libs/i386/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.dylib" "impute.buildbin-libdir/impute/libs/i386/impute.so"
>>>>>>>
>>>>>>> INSTALLATION OF ppc LIBS WITH 'R_ARCH=/ppc R CMD INSTALL --preclean --no-multiarch --no-test-load --library=impute.buildbin-libdir --libs-only impute_1.31.1.tar.gz'
>>>>>>>
* installing *source* package 'impute' ...
** libs
*** arch - ppc
gfortran -arch ppc -fPIC -g -O2 -c knnimpute.f -o knnimpute.o
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o impute.so knnimpute.o -lgfortran -lSystemStubs -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.11-bioc/meat/impute.buildbin-libdir/impute/libs/ppc
* DONE (impute)
>>>>>>>
>>>>>>> FIXING LINKS FOR impute.buildbin-libdir/impute/libs/ppc/impute.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgcc_s.1.dylib" "impute.buildbin-libdir/impute/libs/ppc/impute.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgfortran.2.dylib" "impute.buildbin-libdir/impute/libs/ppc/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.5.2.dylib" "impute.buildbin-libdir/impute/libs/ppc/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.dylib" "impute.buildbin-libdir/impute/libs/ppc/impute.so"
>>>>>>>
>>>>>>> INSTALLATION OF x86_64 LIBS WITH 'R_ARCH=/x86_64 R CMD INSTALL --preclean --no-multiarch --no-test-load --library=impute.buildbin-libdir --libs-only impute_1.31.1.tar.gz'
>>>>>>>
* installing *source* package 'impute' ...
** libs
*** arch - x86_64
gfortran -arch x86_64 -fPIC -g -O2 -c knnimpute.f -o knnimpute.o
gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o impute.so knnimpute.o -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.11-bioc/meat/impute.buildbin-libdir/impute/libs/x86_64
* DONE (impute)
>>>>>>>
>>>>>>> FIXING LINKS FOR impute.buildbin-libdir/impute/libs/x86_64/impute.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgcc_s.1.dylib" "impute.buildbin-libdir/impute/libs/x86_64/impute.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgfortran.2.dylib" "impute.buildbin-libdir/impute/libs/x86_64/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.5.2.dylib" "impute.buildbin-libdir/impute/libs/x86_64/impute.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.dylib" "impute.buildbin-libdir/impute/libs/x86_64/impute.so"