ddgraph 1.0.3
Robert Stojnic
| Snapshot Date: 2012-06-20 15:22:40 -0700 (Wed, 20 Jun 2012) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ddgraph | | Last Changed Rev: 66797 / Revision: 66885 | | Last Changed Date: 2012-06-18 07:40:12 -0700 (Mon, 18 Jun 2012) |
| lamb1 | Linux (openSUSE 12.1) / x86_64 | OK | OK | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Leopard (10.5.8) / i386 | OK | ERROR | [ OK ] |
| perceval | Mac OS X Leopard (10.5.8) / i386 | OK | ERROR | OK |
>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=ddgraph.buildbin-libdir ddgraph_1.0.3.tar.gz'
>>>>>>>
* installing *source* package 'ddgraph' ...
** libs
*** arch - i386
g++ -arch i386 -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include/i386 -DNDEBUG -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/2.15/Resources/library/Rcpp/include" -fPIC -g -O2 -Wall -fasm-blocks -c mcX2cloop.cpp -o mcX2cloop.o
mcX2cloop.cpp: In function 'SEXPREC* mcX2CLoopC(SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*)':
mcX2cloop.cpp:14: warning: label 'Rcpp' defined but not used
g++ -arch i386 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o ddgraph.so mcX2cloop.o /Library/Frameworks/R.framework/Versions/2.15/Resources/library/Rcpp/lib/i386/libRcpp.a -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.11-bioc/meat/ddgraph.buildbin-libdir/ddgraph/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for 'plot' from package 'graphics' in package 'ddgraph'
** help
*** installing help indices
** building package indices
** installing vignettes
'ddgraph.Rnw'
** testing if installed package can be loaded
* DONE (ddgraph)
>>>>>>>
>>>>>>> FIXING LINKS FOR ddgraph.buildbin-libdir/ddgraph/libs/i386/ddgraph.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgcc_s.1.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/i386/ddgraph.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgfortran.2.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/i386/ddgraph.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.5.2.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/i386/ddgraph.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/i386/ddgraph.so"
>>>>>>>
>>>>>>> INSTALLATION OF ppc LIBS WITH 'R_ARCH=/ppc R CMD INSTALL --preclean --no-multiarch --no-test-load --library=ddgraph.buildbin-libdir --libs-only ddgraph_1.0.3.tar.gz'
>>>>>>>
* installing *source* package 'ddgraph' ...
** libs
*** arch - ppc
g++ -arch ppc -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include/ppc -DNDEBUG -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/2.15/Resources/library/Rcpp/include" -fPIC -g -O2 -c mcX2cloop.cpp -o mcX2cloop.o
g++ -arch ppc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o ddgraph.so mcX2cloop.o /Library/Frameworks/R.framework/Versions/2.15/Resources/library/Rcpp/lib/ppc/libRcpp.a -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.11-bioc/meat/ddgraph.buildbin-libdir/ddgraph/libs/ppc
* DONE (ddgraph)
>>>>>>>
>>>>>>> FIXING LINKS FOR ddgraph.buildbin-libdir/ddgraph/libs/ppc/ddgraph.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgcc_s.1.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/ppc/ddgraph.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgfortran.2.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/ppc/ddgraph.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.5.2.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/ppc/ddgraph.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/ppc/ddgraph.so"
>>>>>>>
>>>>>>> INSTALLATION OF x86_64 LIBS WITH 'R_ARCH=/x86_64 R CMD INSTALL --preclean --no-multiarch --no-test-load --library=ddgraph.buildbin-libdir --libs-only ddgraph_1.0.3.tar.gz'
>>>>>>>
* installing *source* package 'ddgraph' ...
** libs
*** arch - x86_64
g++ -arch x86_64 -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include/x86_64 -DNDEBUG -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/2.15/Resources/library/Rcpp/include" -fPIC -g -O2 -c mcX2cloop.cpp -o mcX2cloop.o
g++ -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o ddgraph.so mcX2cloop.o /Library/Frameworks/R.framework/Versions/2.15/Resources/library/Rcpp/lib/x86_64/libRcpp.a -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.11-bioc/meat/ddgraph.buildbin-libdir/ddgraph/libs/x86_64
* DONE (ddgraph)
>>>>>>>
>>>>>>> FIXING LINKS FOR ddgraph.buildbin-libdir/ddgraph/libs/x86_64/ddgraph.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgcc_s.1.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/x86_64/ddgraph.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgfortran.2.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/x86_64/ddgraph.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.5.2.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/x86_64/ddgraph.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.dylib" "ddgraph.buildbin-libdir/ddgraph/libs/x86_64/ddgraph.so"