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Package 344/565HostnameOS / ArchBUILDCHECKBUILD BIN
MEDME 1.17.0
Mattia Pelizzola
Snapshot Date: 2012-06-20 15:22:40 -0700 (Wed, 20 Jun 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/MEDME
Last Changed Rev: 64680 / Revision: 66885
Last Changed Date: 2012-03-30 15:15:56 -0700 (Fri, 30 Mar 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  ERROR  skipped 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  ERROR  skipped  skipped 
pitt Mac OS X Leopard (10.5.8) / i386 [ ERROR ] skipped  skipped 
perceval Mac OS X Leopard (10.5.8) / i386  ERROR  skipped  skipped 

Summary

Package: MEDME
Version: 1.17.0
Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MEDME
StartedAt: 2012-06-20 18:33:34 -0700 (Wed, 20 Jun 2012)
EndedAt: 2012-06-20 18:34:11 -0700 (Wed, 20 Jun 2012)
EllapsedTime: 36.4 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'MEDME/DESCRIPTION' ... OK
* preparing 'MEDME':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* creating vignettes ... ERROR

Attaching package: 'MEDME'

The following object(s) are masked from 'package:stats':

    predict, smooth

Loading required package: BSgenome
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following object(s) are masked from 'package:stats':

    xtabs

The following object(s) are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, cbind,
    colnames, duplicated, eval, get, intersect, lapply, mapply, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rbind, rep.int,
    rownames, sapply, setdiff, table, tapply, union, unique

Loading required package: IRanges
Loading required package: GenomicRanges
Loading required package: Biostrings

Error: processing vignette 'MEDME.rnw' failed with diagnostics:
 chunk 5 (label = MEDMEmodel) 
Error in predict(object, ...) : 
  data needs to be an object of class MEDMEset ..
Execution halted