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Package 345/609HostnameOS / ArchBUILDCHECKBUILD BIN
LVSmiRNA 1.8.0
Stefano Calza
Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/LVSmiRNA
Last Changed Rev: 70050 / Revision: 74773
Last Changed Date: 2012-10-01 15:16:24 -0700 (Mon, 01 Oct 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  WARNINGS 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS [ OK ]
perceval Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 

Summary

Package: LVSmiRNA
Version: 1.8.0
Command: rm -rf LVSmiRNA.buildbin-libdir && mkdir LVSmiRNA.buildbin-libdir && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=LVSmiRNA.buildbin-libdir LVSmiRNA_1.8.0.tar.gz
StartedAt: 2013-03-25 04:05:48 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 04:06:18 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 30.7 seconds
RetCode: 0
Status:  OK  
PackageFile: LVSmiRNA_1.8.0.zip
PackageFileSize: 584.2 KiB

Command output

install for i386

* installing *source* package 'LVSmiRNA' ...
** libs
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG -DHAVE_ZLIB    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c basic_fns.c -o basic_fns.o
basic_fns.c: In function 'lvs_median':
basic_fns.c:146:7: warning: unused variable 'i' [-Wunused-variable]
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG -DHAVE_ZLIB    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c init.c -o init.o
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG -DHAVE_ZLIB    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c lvs_rlm.c -o lvs_rlm.o
lvs_rlm.c: In function 'gamma_fit':
lvs_rlm.c:175:30: warning: variable 'converged' set but not used [-Wunused-but-set-variable]
lvs_rlm.c: In function 'test_gamma_fit':
lvs_rlm.c:286:30: warning: variable 'converged' set but not used [-Wunused-but-set-variable]
gcc -m32 -shared -s -static-libgcc -o LVSmiRNA.dll tmp.def basic_fns.o init.o lvs_rlm.o -lRzlib -lgfortran -LD:/biocbld/BBS-2˜1.11-/R/bin/i386 -lRlapack -LD:/biocbld/BBS-2˜1.11-/R/bin/i386 -lRblas -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/LVSmiRNA.buildbin-libdir/LVSmiRNA/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import 'boxplot' when loading 'graphics'
** help
*** installing help indices
** building package indices
** installing vignettes
   'LVSmiRNA.Rnw' 
** testing if installed package can be loaded
Warning: replacing previous import 'boxplot' when loading 'graphics'

install for x64

* installing *source* package 'LVSmiRNA' ...
** libs
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG -DHAVE_ZLIB    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c basic_fns.c -o basic_fns.o
basic_fns.c: In function 'lvs_median':
basic_fns.c:146:7: warning: unused variable 'i' [-Wunused-variable]
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG -DHAVE_ZLIB    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c init.c -o init.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG -DHAVE_ZLIB    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c lvs_rlm.c -o lvs_rlm.o
lvs_rlm.c: In function 'gamma_fit':
lvs_rlm.c:175:30: warning: variable 'converged' set but not used [-Wunused-but-set-variable]
lvs_rlm.c: In function 'test_gamma_fit':
lvs_rlm.c:286:30: warning: variable 'converged' set but not used [-Wunused-but-set-variable]
gcc -m64 -shared -s -static-libgcc -o LVSmiRNA.dll tmp.def basic_fns.o init.o lvs_rlm.o -lRzlib -lgfortran -LD:/biocbld/BBS-2˜1.11-/R/bin/x64 -lRlapack -LD:/biocbld/BBS-2˜1.11-/R/bin/x64 -lRblas -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/LVSmiRNA.buildbin-libdir/LVSmiRNA/libs/x64
** testing if installed package can be loaded
Warning: replacing previous import 'boxplot' when loading 'graphics'
* MD5 sums
packaged installation of 'LVSmiRNA' as LVSmiRNA_1.8.0.zip

* DONE (LVSmiRNA)