Package: GlobalAncova

Version: 3.25.0

Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GlobalAncova

StartedAt: 2012-06-20 17:38:42 -0700 (Wed, 20 Jun 2012)

EndedAt: 2012-06-20 17:40:32 -0700 (Wed, 20 Jun 2012)

EllapsedTime: 110.6 seconds

RetCode: 1

Status:  ERROR

PackageFile: None

PackageFileSize: NA

* checking for file 'GlobalAncova/DESCRIPTION' ... OK
* preparing 'GlobalAncova':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: corpcor
Loading required package: globaltest
Warning in .simpleDuplicateClass(def, prev) :
  A specification for class "data.frameOrNULL" in package 'globaltest' seems equivalent to one from package 'Biobase' and is not turning on duplicate class definitions for this class
Loading required package: Biobase
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following object(s) are masked from 'package:stats':

    xtabs

The following object(s) are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, cbind,
    colnames, duplicated, eval, get, intersect, lapply, mapply, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rbind, rep.int,
    rownames, sapply, setdiff, table, tapply, union, unique

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: AnnotationDbi
Loading required package: org.Hs.eg.db
Loading required package: DBI


Loading required package: Rgraphviz
Loading required package: graph
Loading required package: grid

Attaching package: 'Rgraphviz'

The following object(s) are masked from 'package:grid':

    bezierPoints


Loading required package: annotate

Attaching package: 'annotate'

The following object(s) are masked from 'package:Rgraphviz':

    toFile


Error: processing vignette 'GlobalAncova.rnw' failed with diagnostics:
 chunk 31 (label = gago) 
Error in apply(xs2w[, p:2], 1, cumsum) : 
  dim(X) must have a positive length
Execution halted