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Package 156/610HostnameOS / ArchBUILDCHECKBUILD BIN
DDiGGER 1.0.0
Diana HP Low
Snapshot Date: 2012-10-11 16:21:24 -0700 (Thu, 11 Oct 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/DDiGGER
Last Changed Rev: 70050 / Revision: 70422
Last Changed Date: 2012-10-01 15:16:24 -0700 (Mon, 01 Oct 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK [ OK ]
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: DDiGGER
Version: 1.0.0
Command: /home/biocbuild/bbs-2.11-bioc/R/bin/R CMD check --no-vignettes --timings DDiGGER_1.0.0.tar.gz
StartedAt: 2012-10-12 00:55:52 -0700 (Fri, 12 Oct 2012)
EndedAt: 2012-10-12 01:02:50 -0700 (Fri, 12 Oct 2012)
EllapsedTime: 417.1 seconds
RetCode: 0
Status:  OK 
CheckDir: DDiGGER.Rcheck
Warnings: 0

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.11-bioc/meat/DDiGGER.Rcheck’
* using R version 2.15.1 (2012-06-22)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘DDiGGER/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘DDiGGER’ version ‘1.0.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘DDiGGER’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

DDiGGER.Rcheck/00install.out:

* installing *source* package ‘DDiGGER’ ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   ‘DDiGGER.Rnw’ using ‘latin-9’ 
** testing if installed package can be loaded

* DONE (DDiGGER)

DDiGGER.Rcheck/DDiGGER-Ex.timings:

nameusersystemelapsed
DDG_gui0.1800.0040.581
boot_voting169.598 1.664176.691
checkDependencies1.6850.1002.030
ddg18.4640.0568.526
ddg242.047 0.30042.742
fetchGEOSample0.0000.0000.001
getGenes2.7480.0843.017
hyperDDG2.1880.0722.557
plotbvoting000
plotsvoting12.813 0.07612.894
simple_voting11.717 0.07211.974
stdcox0.1440.0000.161