Package: ChIPXpress

Version: 0.99.7

Command: rm -rf ChIPXpress.buildbin-libdir && mkdir ChIPXpress.buildbin-libdir && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=ChIPXpress.buildbin-libdir ChIPXpress_0.99.7.tar.gz >ChIPXpress-install.out 2>&1 && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD check --library=ChIPXpress.buildbin-libdir --install="check:ChIPXpress-install.out" --force-multiarch --no-vignettes --timings ChIPXpress_0.99.7.tar.gz && mv ChIPXpress.buildbin-libdir/* ChIPXpress.Rcheck/ && rmdir ChIPXpress.buildbin-libdir

StartedAt: 2012-09-28 00:11:24 -0700 (Fri, 28 Sep 2012)

EndedAt: 2012-09-28 00:20:30 -0700 (Fri, 28 Sep 2012)

EllapsedTime: 545.5 seconds

RetCode: 0

Status:  OK

CheckDir: ChIPXpress.Rcheck

Warnings: 0

* using log directory 'D:/biocbld/bbs-2.11-bioc/meat/ChIPXpress.Rcheck'
* using R version 2.15.1 (2012-06-22)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ChIPXpress/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'ChIPXpress' version '0.99.7'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'ChIPXpress' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
** running tests for arch 'i386'
  Running 'runTests.R'
 OK
** running tests for arch 'x64'
  Running 'runTests.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

install for i386

* installing *source* package 'ChIPXpress' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'ChIPXpress.Rnw' 
** testing if installed package can be loaded

install for x64

* installing *source* package 'ChIPXpress' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ChIPXpress' as ChIPXpress_0.99.7.zip

* DONE (ChIPXpress)