Package: SRAdb

Version: 1.10.0

Command: /home/hpages/test-puck5/bbs-2.10-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SRAdb

StartedAt: 2012-03-31 21:53:30 -0700 (Sat, 31 Mar 2012)

EndedAt: 2012-03-31 21:57:36 -0700 (Sat, 31 Mar 2012)

EllapsedTime: 246.4 seconds

RetCode: 1

Status:  ERROR

PackageFile: None

PackageFileSize: NA

* checking for file 'SRAdb/DESCRIPTION' ... OK
* preparing 'SRAdb':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: RSQLite
Loading required package: DBI
Loading required package: graph
Loading required package: RCurl
Loading required package: bitops
Setting options('download.file.method.GEOquery'='curl')
trying URL 'http://gbnci.abcc.ncifcrf.gov/backup/SRAmetadb.sqlite.gz'
Content type 'text/plain; charset=ISO-8859-1' length 191998695 bytes (183.1 Mb)
opened URL
=================================================
downloaded 183.1 Mb

Unzipping...

Metadata associate with downloaded file:

c("schema version", "creation timestamp")c("1.0", "2012-04-01 01:29:59")
Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet,  : 
  Running 'texi2dvi' on 'SRAdb.tex' failed.
LaTeX errors:
! Package auto-pst-pdf Error: 
    "shell escape" (or "write18") is not enabled:
    auto-pst-pdf will not work!
.
Calls: <Anonymous> -> texi2pdf -> texi2dvi
Execution halted