GraphAlignment 1.18.0
Joern P. Meier
| Snapshot Date: 2012-09-23 17:01:39 -0700 (Sun, 23 Sep 2012) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_10/madman/Rpacks/GraphAlignment | | Last Changed Rev: 64678 / Revision: 69725 | | Last Changed Date: 2012-03-30 15:05:02 -0700 (Fri, 30 Mar 2012) |
| lamb2 | Linux (openSUSE 11.4) / x86_64 | OK | OK | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | [ OK ] |
| petty | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
install for i386
* installing *source* package 'GraphAlignment' ...
** libs
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c GA_alloc.c -o GA_alloc.o
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c GA_matrix.c -o GA_matrix.o
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c GA_matrix_R.c -o GA_matrix_R.o
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c GA_message.c -o GA_message.o
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c GA_vector.c -o GA_vector.o
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c GA_vector_R.c -o GA_vector_R.o
GA_vector_R.c: In function 'GA_clamp_mode_from_R':
GA_vector_R.c:139:9: warning: unused variable 'size' [-Wunused-variable]
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c GraphAlignment.c -o GraphAlignment.o
GraphAlignment.c: In function 'GA_encode_directed_graph':
GraphAlignment.c:138:20: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
GraphAlignment.c:159:20: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
GraphAlignment.c: In function 'GA_directed_mode_from_R':
GraphAlignment.c:264:9: warning: unused variable 'size' [-Wunused-variable]
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c lap.c -o lap.o
lap.c: In function 'LAP_lap':
lap.c:293:5: warning: 'last' may be used uninitialized in this function [-Wuninitialized]
lap.c:269:16: warning: 'min' may be used uninitialized in this function [-Wuninitialized]
gcc -shared -s -static-libgcc -o GraphAlignment.dll tmp.def GA_alloc.o GA_matrix.o GA_matrix_R.o GA_message.o GA_vector.o GA_vector_R.o GraphAlignment.o lap.o -LE:/biocbld/BBS-2˜1.10-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.10-bioc/meat/GraphAlignment.buildbin-libdir/GraphAlignment/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
'GraphAlignment.Rnw'
** testing if installed package can be loaded
install for x64
* installing *source* package 'GraphAlignment' ...
** libs
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c GA_alloc.c -o GA_alloc.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c GA_matrix.c -o GA_matrix.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c GA_matrix_R.c -o GA_matrix_R.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c GA_message.c -o GA_message.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c GA_vector.c -o GA_vector.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c GA_vector_R.c -o GA_vector_R.o
GA_vector_R.c: In function 'GA_clamp_mode_from_R':
GA_vector_R.c:139:9: warning: unused variable 'size' [-Wunused-variable]
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c GraphAlignment.c -o GraphAlignment.o
GraphAlignment.c: In function 'GA_encode_directed_graph':
GraphAlignment.c:138:20: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
GraphAlignment.c:159:20: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
GraphAlignment.c: In function 'GA_directed_mode_from_R':
GraphAlignment.c:264:9: warning: unused variable 'size' [-Wunused-variable]
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c lap.c -o lap.o
lap.c: In function 'LAP_lap':
lap.c:293:5: warning: 'last' may be used uninitialized in this function [-Wuninitialized]
lap.c:269:16: warning: 'min' may be used uninitialized in this function [-Wuninitialized]
gcc -m64 -shared -s -static-libgcc -o GraphAlignment.dll tmp.def GA_alloc.o GA_matrix.o GA_matrix_R.o GA_message.o GA_vector.o GA_vector_R.o GraphAlignment.o lap.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2~1.10-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.10-bioc/meat/GraphAlignment.buildbin-libdir/GraphAlignment/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GraphAlignment' as GraphAlignment_1.18.0.zip
* DONE (GraphAlignment)