* checking for working latex ... OK
* using log directory '/home/biocbuild/bbs-2.1-data-experiment/meat/stjudem.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'stjudem/DESCRIPTION' ... OK
* this is package 'stjudem' version '1.2.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'stjudem' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating stjudem-Ex.R ... OK
* checking examples ... OK
* creating stjudem-manual.tex ... OK
* checking stjudem-manual.tex ... OK