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Package 217/233HostnameOS / ArchBUILDCHECKBUILD BIN
sscore 1.10.0
Richard Kennedy
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/sscore
Last Changed Rev: 27709 / Revision: 30966
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: sscore
Version: 1.10.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build sscore
StartedAt: 2008-04-09 17:01:42 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 17:03:05 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 83.6 seconds
RetCode: 0
Status: OK
PackageFile: sscore_1.10.0.tar.gz
PackageFileSize: 313.8 KiB

Command output

* checking for file 'sscore/DESCRIPTION' ... OK
* preparing 'sscore':
* checking DESCRIPTION meta-information ... OK
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst114003558


---------- Making package sscore ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'sscore'
     Formats: text html latex example chm 
  OneStepBiweightAlgorithm          text    html    latex           chm
  SScore                            text    html    latex   example chm
  SScoreBatch                       text    html    latex   example chm
  computeAffxRawQ                   text    html    latex           chm
  computeAffxSFandSDT               text    html    latex   example chm
  computeOutlier                    text    html    latex   example chm
  computeRawQ                       text    html    latex           chm
  computeSFandSDT                   text    html    latex   example chm
  computeZoneIInfo                  text    html    latex           chm
  computeZonenoise                  text    html    latex           chm
  trimMean                          text    html    latex           chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\sscore\chm\sscore.chm



HHC4016: Warning: Cannot open "Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  preparing package sscore for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affyio
Loading required package: preprocessCore
  adding MD5 sums

* DONE (sscore)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'sscore_1.10.0.tar.gz'