simulatorAPMS 1.10.0
Tony Chiang
| Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/simulatorAPMS | | Last Changed Rev: 27709 / Revision: 30966 | | Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.1-bioc/meat/simulatorAPMS.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'simulatorAPMS/DESCRIPTION' ... OK
* this is package 'simulatorAPMS' version '1.10.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'simulatorAPMS' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating simulatorAPMS-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating simulatorAPMS-manual.tex ... OK
* checking simulatorAPMS-manual.tex ... OK
installing R.css in D:/biocbld/bbs-2.1-bioc/meat/simulatorAPMS.Rcheck
---------- Making package simulatorAPMS ------------
adding build stamp to DESCRIPTION
installing R files
installing inst files
installing data files
installing man source files
installing indices
not zipping data
installing help
Note: unmatched right brace in 'filteredProt' on or after line 14
Note: unmatched right brace in 'filteredProt.Rd' on or after line 14
>>> Building/Updating help pages for package 'simulatorAPMS'
Formats: text html latex example chm
APComEX text html latex example chm
PPIEX text html latex example chm
TSNMatrix text html latex example chm
applyDeformationError text html latex example chm
applyFNErrors text html latex example chm
applyFPErrors text html latex example chm
applyStickyError text html latex example chm
compIndep text html latex example chm
filteredProt text html latex example chm
fullSimEX text html latex example chm
missedProtEX text html latex example chm
missedProtHMSPCI text html latex example chm
recordSticky text html latex example chm
runAPComplex text html latex example chm
runCompIndep text html latex example chm
runSimEX text html latex example chm
runSimulators text html latex example chm
simEX text html latex example chm
simulator text html latex example chm
simulatorD text html latex example chm
simulatorS text html latex example chm
vBaits text html latex example chm
vBaitsEX text html latex example chm
vDeformEX text html latex example chm
vDeformed text html latex example chm
vDeformedEX text html latex example chm
vStickyEX text html latex example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.
HHC4016: Warning: Cannot open "\Program Files\Windows Resource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.1-bioc\meat\simulatorAPMS.Rcheck\00_pkg_src\simulatorAPMS\chm\simulatorAPMS.chm
HHC4016: Warning: Cannot open "\Program Files\Windows Resource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
The following files were not compiled:
adding MD5 sums
* DONE (simulatorAPMS)