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Package 120/233HostnameOS / ArchBUILDCHECKBUILD BIN
macat 1.12.0
Joern Toedling
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/macat
Last Changed Rev: 27709 / Revision: 30966
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: macat
Version: 1.12.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build macat
StartedAt: 2008-04-09 16:37:10 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 16:38:17 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 67.0 seconds
RetCode: 0
Status: OK
PackageFile: macat_1.12.0.tar.gz
PackageFileSize: 950.7 KiB

Command output

* checking for file 'macat/DESCRIPTION' ... OK
* preparing 'macat':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst293257366


---------- Making package macat ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing demos
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'macat'
     Formats: text html latex example chm 
  buildMACAT                        text    html    latex   example chm
  compute.sliding                   text    html    latex   example chm
  discreteKernelize                 text    html    latex   example chm
  discretize                        text    html    latex           chm
  discretize.tscores                text    html    latex   example chm
  discretizeAll                     text    html    latex   example chm
  evalScoring                       text    html    latex   example chm
  evaluateParameters                text    html    latex   example chm
  get.results                       text    html    latex   example chm
  html                              text    html    latex           chm
  kernelize                         text    html    latex   example chm
  kernelizeAll                      text    html    latex   example chm
  kernelizeToPython                 text    html    latex   example chm
  kernels                           text    html    latex   example chm
  loaddatapkg                       text    html    latex   example chm
  macat-internal                    text    html    latex           chm
  plot.MACATevalScoring             text    html    latex   example chm
  preprocessedLoader                text    html    latex   example chm
  pythondata                        text    html    latex   example chm
  scoring                           text    html    latex   example chm
  stjd                              text    html    latex   example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "am Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\macat\chm\macat.chm



HHC4016: Warning: Cannot open "am Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  preparing package macat for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
  adding MD5 sums

* DONE (macat)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'macat_1.12.0.tar.gz'