GlobalAncova 3.4.0
R. Meister
| Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/GlobalAncova | | Last Changed Rev: 27709 / Revision: 30966 | | Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | [ OK ] | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for file 'GlobalAncova/DESCRIPTION' ... OK
* preparing 'GlobalAncova':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst600416180
---------- Making package GlobalAncova ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making GlobalAncova.d from GlobalAncova.c
making ludcmp.d from ludcmp.c
making matrix.d from matrix.c
gcc-sjlj -std=gnu99 -Id:/biocbld/bbs-2.1-bioc/R/include -O3 -Wall -c GlobalAncova.c -o GlobalAncova.o
GlobalAncova.c: In function 'permut':
GlobalAncova.c:198: warning: 'ord_perm' may be used uninitialized in this function
GlobalAncova.c: In function 'permut_withFperm':
GlobalAncova.c:119: warning: 'ord_perm' may be used uninitialized in this function
gcc-sjlj -std=gnu99 -Id:/biocbld/bbs-2.1-bioc/R/include -O3 -Wall -c ludcmp.c -o ludcmp.o
ludcmp.c:232:24: warning: no newline at end of file
gcc-sjlj -std=gnu99 -Id:/biocbld/bbs-2.1-bioc/R/include -O3 -Wall -c matrix.c -o matrix.o
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I d:/biocbld/bbs-2.1-bioc/R/include -i GlobalAncova_res.rc -o GlobalAncova_res.o
gcc-sjlj -std=gnu99 -shared -s -o GlobalAncova.dll GlobalAncova.def GlobalAncova.o ludcmp.o matrix.o GlobalAncova_res.o -Ld:/biocbld/bbs-2.1-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
installing inst files
installing data files
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'GlobalAncova'
Formats: text html latex example chm
GAGO text html latex example chm
GlobalAncova-methods text html latex chm
GlobalAncova text html latex example chm
GlobalAncova.closed-methods text html latex chm
GlobalAncova.closed text html latex chm
GlobalAncova.decomp text html latex example chm
Plot.all text html latex example chm
Plot.genes-methods text html latex chm
Plot.genes text html latex example chm
Plot.sequential text html latex example chm
Plot.subjects-methods text html latex chm
Plot.subjects text html latex example chm
colon.normal text html latex example chm
colon.pheno text html latex example chm
colon.tumour text html latex example chm
pair.compare text html latex example chm
pathways text html latex example chm
phenodata text html latex example chm
vantVeer text html latex example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.
HHC4016: Warning: Cannot open "ram Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.1-bioc\meat\GlobalAncova\chm\GlobalAncova.chm
HHC4016: Warning: Cannot open "ram Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
The following files were not compiled:
preparing package GlobalAncova for lazy loading
Loading required package: corpcor
Loading required package: globaltest
Loading required package: multtest
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: survival
Loading required package: splines
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: annotate
Loading required package: xtable
adding MD5 sums
* DONE (GlobalAncova)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'GlobalAncova_3.4.0.tar.gz'