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Package 63/233HostnameOS / ArchBUILDCHECKBUILD BIN
EBarrays 2.2.0
Ming Yuan
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/EBarrays
Last Changed Rev: 27709 / Revision: 30966
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: EBarrays
Version: 2.2.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build EBarrays
StartedAt: 2008-04-09 16:17:52 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 16:21:37 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 225.3 seconds
RetCode: 0
Status: OK
PackageFile: EBarrays_2.2.0.tar.gz
PackageFileSize: 612.7 KiB

Command output

* checking for file 'EBarrays/DESCRIPTION' ... OK
* preparing 'EBarrays':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst586832171


---------- Making package EBarrays ------------
  adding build stamp to DESCRIPTION
  making DLL ...
making ebarrays.d from ebarrays.c
gcc-sjlj  -std=gnu99  -Id:/biocbld/bbs-2.1-bioc/R/include     -O3 -Wall  -c ebarrays.c -o ebarrays.o
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I d:/biocbld/bbs-2.1-bioc/R/include  -i EBarrays_res.rc -o EBarrays_res.o
gcc-sjlj  -std=gnu99  -shared -s  -o EBarrays.dll EBarrays.def ebarrays.o EBarrays_res.o  -Ld:/biocbld/bbs-2.1-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing demos
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
Note: unmatched right brace in 'postprob' on or after line 66
Note: unmatched right brace in 'postprob.Rd' on or after line 66
 >>> Building/Updating help pages for package 'EBarrays'
     Formats: text html latex example chm 
  EBarrays-Internal                 text    html    latex           chm
  crit.fun                          text    html    latex   example chm
  ebarraysFamily-class              text    html    latex   example chm
  ebplots                           text    html    latex   example chm
  emfit                             text    html    latex   example chm
  gould                             text    html    latex   example chm
  postprob                          text    html    latex   example chm
  utilities                         text    html    latex   example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "C NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\EBarrays\chm\EBarrays.chm



HHC4016: Warning: Cannot open "C NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  preparing package EBarrays for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: lattice
Loading required package: cluster
  adding MD5 sums

* DONE (EBarrays)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'EBarrays_2.2.0.tar.gz'