AnnBuilder 1.16.0
J. Zhang
| Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/AnnBuilder | | Last Changed Rev: 27709 / Revision: 30966 | | Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | [ OK ] | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for file 'AnnBuilder/DESCRIPTION' ... OK
* preparing 'AnnBuilder':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst65209970
---------- Making package AnnBuilder ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing data files
preparing package AnnBuilder for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: XML
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'AnnBuilder'
Formats: text html latex example chm
ABPkgBuilder text html latex example chm
EG-class text html latex chm
GEO-class text html latex example chm
GO-class text html latex chm
GOPkgBuilder text html latex example chm
GOXMLParser text html latex chm
GP-class text html latex example chm
HG-class text html latex chm
IPI-class text html latex example chm
KEGG-class text html latex example chm
KEGGPkgBuilder text html latex chm
LL-class text html latex example chm
MeSHParser text html latex chm
PFAM-class text html latex example chm
SPPkgBuilder text html latex chm
UG-class text html latex example chm
YEAST-class text html latex example chm
YG-class text html latex example chm
addNamespace text html latex example chm
athPkgBuilder text html latex example chm
cMapPathBuilder text html latex example chm
chrLocPkgBuilder text html latex example chm
cleanSrcObjs text html latex chm
cols2Env text html latex example chm
descriptionInfo text html latex example chm
downloadSourceData text html latex chm
fileMuncher text html latex example chm
fileToXML text html latex example chm
getChroLocation text html latex example chm
getDPStats text html latex example chm
getKEGGIDNName text html latex example chm
getPubDataGo text html latex chm
getSrcBuilt text html latex example chm
getSrcUrl text html latex chm
getUGShortName text html latex example chm
getYeastData text html latex example chm
homoPkgBuilder text html latex chm
loadFromUrl text html latex example chm
makeLLDB text html latex chm
makeSrcInfo text html latex example chm
map2LL text html latex example chm
pfamBuilder text html latex example chm
print.ABQCList text html latex example chm
pubDataURLs text html latex example chm
pubRepo-class text html latex example chm
queryGEO text html latex example chm
readSourceUrlConfig text html latex chm
resolveMaps text html latex example chm
sourceURLs text html latex example chm
unifyMappings text html latex example chm
wget text html latex chm
writeChrLength text html latex example chm
writeHomoXMLData text html latex chm
writeManPage text html latex example chm
writeSourceUrlConfig text html latex chm
writeXMLHeader text html latex example chm
yeastAnn text html latex example chm
yeastPkgBuilder text html latex example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.
HHC4016: Warning: Cannot open "ource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.1-bioc\meat\AnnBuilder\chm\AnnBuilder.chm
HHC4016: Warning: Cannot open "ource Kits\Tools\;c:\Program Files\Affymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
The following files were not compiled:
adding MD5 sums
* DONE (AnnBuilder)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'AnnBuilder_1.16.0.tar.gz'