ABarray 1.6.0
Yongming Andrew Sun
| Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/ABarray | | Last Changed Rev: 27709 / Revision: 30966 | | Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | [ OK ] | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for working latex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.1-bioc/meat/ABarray.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'ABarray/DESCRIPTION' ... OK
* this is package 'ABarray' version '1.6.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ABarray' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
ABarray: no visible binding for global variable 'colSn'
ABarrayGUI : getImputeFunc: no visible binding for global variable
'knnRbtn'
getPantherMap: no visible binding for global variable 'panther'
Found possibly global 'T' or 'F' in the following functions:
ABarray ABarrayGUI calcsn concord cvv cvvPlot doANOVA doLPE
doPlotEset doPlotFCT hclusterPlot icpPlot imputeFlag mamaplot
mvaPair2 qnNormalize snSummary
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating ABarray-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating ABarray-manual.tex ... OK
* checking ABarray-manual.tex ... OK
* Installing *source* package 'ABarray' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: multtest
Loading required package: survival
Loading required package: splines
Loading required package: tcltk
Loading Tcl/Tk interface ... done
** help
>>> Building/Updating help pages for package 'ABarray'
Formats: text html latex example
ABarray text html latex example
ABarrayGUI text html latex example
calcsn text html latex example
concord text html latex example
cvv text html latex example
cvvPlot text html latex example
doANOVA text html latex example
doLPE text html latex example
doPlotEset text html latex example
doPlotFCT text html latex example
doVennDiagram text html latex example
drawVennDiagram text html latex example
getMemberEset text html latex example
getPantherMap text html latex example
hclusterPlot text html latex example
icpPlot text html latex example
imputeFlag text html latex example
lpe.fdr.BH text html latex example
mamaplot text html latex example
matrixPlot text html latex example
mvaPair2 text html latex example
panel.cor text html latex example
panel.scatter text html latex example
qnNormalize text html latex example
rgcolorsfunc text html latex example
savejpg text html latex example
scaleColorBar text html latex example
snSummary text html latex example
** building package indices ...
* DONE (ABarray)