Ruuid 1.16.1
Biocore Team c/o BioC user list
| Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/Ruuid | | Last Changed Rev: 27821 / Revision: 30807 | | Last Changed Date: 2007-10-06 15:08:14 -0700 (Sat, 06 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.1-bioc/meat/Ruuid.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'Ruuid/DESCRIPTION' ... OK
* this is package 'Ruuid' version '1.16.1'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'Ruuid' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating Ruuid-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating Ruuid-manual.tex ... OK
* checking Ruuid-manual.tex ... OK
installing R.css in D:/biocbld/bbs-2.1-bioc/meat/Ruuid.Rcheck
---------- Making package Ruuid ------------
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
running src/Makefile.win ...
gcc-sjlj -std=gnu99 -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32 -c Ruuid.c -o Ruuid.o
gcc-sjlj -std=gnu99 -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32 -c pack.c -o pack.o
gcc-sjlj -std=gnu99 -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32 -c parse.c -o parse.o
gcc-sjlj -std=gnu99 -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32 -c Rinit.c -o Rinit.o
gcc-sjlj -std=gnu99 -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32 -c unpack.c -o unpack.o
gcc-sjlj -std=gnu99 -Id:/biocbld/bbs-2.1-bioc/R/src/include -O2 -DWin32 -c unparse.c -o unparse.o
rm -f -f Ruuid.a
ar cr Ruuid.a *.o
ranlib Ruuid.a
gcc-sjlj -std=gnu99 -shared -o Ruuid.dll Ruuid.def Ruuid.a -Ld:/biocbld/bbs-2.1-bioc/R/bin -lrpcrt4 -lR
... done
installing DLL
installing R files
installing inst files
preparing package Ruuid for lazy loading
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'Ruuid'
Formats: text html latex example chm
Ruuid-class text html latex example chm
getuuid text html latex example chm
uuidt-class text html latex example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.
HHC4016: Warning: Cannot open "GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.1-bioc\meat\Ruuid.Rcheck\00_pkg_src\Ruuid\chm\Ruuid.chm
HHC4016: Warning: Cannot open "GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".
The following files were not compiled:
adding MD5 sums
* DONE (Ruuid)