Package: cellHTS

Version: 1.8.0

Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check cellHTS_1.8.0.tar.gz

RetCode: 0

Time: 120.9 seconds

Status: OK

CheckDir: cellHTS.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.1-bioc/meat/cellHTS.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'cellHTS/DESCRIPTION' ... OK
* this is package 'cellHTS' version '1.8.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'cellHTS' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating cellHTS-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating cellHTS-manual.tex ... OK
* checking cellHTS-manual.tex ... OK

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/cellHTS.Rcheck


---------- Making package cellHTS ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'cellHTS'
     Formats: text html latex example chm 
  Bscore                            text    html    latex   example chm
  ROC                               text    html    latex   example chm
  annotate                          text    html    latex   example chm
  bdgpbiomart                       text    html    latex   example chm
  configure                         text    html    latex   example chm
  data-KcViab                       text    html    latex   example chm
  data-KcViabSmall                  text    html    latex   example chm
  getEnVisionRawData                text    html    latex   example chm
  getLibraryPlate                   text    html    latex   example chm
  getMatrix                         text    html    latex   example chm
  imageScreen                       text    html    latex   example chm
  normalizeChannels                 text    html    latex   example chm
  normalizePlates                   text    html    latex   example chm
  oneRowPerId                       text    html    latex   example chm
  plotPlateLibrary                  text    html    latex   example chm
  plotSpatialEffects                text    html    latex   example chm
  print.cellHTS                     text    html    latex   example chm
  readPlateData                     text    html    latex   example chm
  screenMatch                       text    html    latex   example chm
  summarizeChannels                 text    html    latex   example chm
  summarizeReplicates               text    html    latex   example chm
  write.tabdel                      text    html    latex   example chm
  writeReport                       text    html    latex   example chm
  writeTab                          text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.1-bioc\meat\cellHTS.Rcheck\00_pkg_src\cellHTS\chm\cellHTS.chm


Compile time: 0 minutes, 1 second
25	Topics
101	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.1-bioc\meat\cellHTS.Rcheck\00_pkg_src\cellHTS\chm\cellHTS.chm, 62,534 bytes
Compression decreased file by 65,554 bytes.
  preparing package cellHTS for lazy loading
Loading required package: prada
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: RColorBrewer
Loading required package: grid
Loading required package: rrcov
Loading required package: robustbase
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: genefilter
Loading required package: survival
Loading required package: splines

Attaching package: 'survival'


	The following object(s) are masked from package:robustbase :

	 heart 

  adding MD5 sums

* DONE (cellHTS)