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| Package 78/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
| GeneMeta 1.10.0 Biocore Team c/o BioC user list Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
| wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
| liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | [ OK ] | OK | |
| pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
| Package: GeneMeta |
| Version: 1.10.0 |
| Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check GeneMeta_1.10.0.tar.gz |
| RetCode: 0 |
| Time: 119.1 seconds |
| Status: OK |
| CheckDir: GeneMeta.Rcheck |
| Warnings: 0 |
* checking for working latex ... OK * using log directory 'E:/biocbld/bbs-2.1-bioc/meat/GeneMeta.Rcheck' * using R version 2.6.0 (2007-10-03) * checking for file 'GeneMeta/DESCRIPTION' ... OK * this is package 'GeneMeta' version '1.10.0' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'GeneMeta' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * creating GeneMeta-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating GeneMeta-manual.tex ... OK * checking GeneMeta-manual.tex ... OK
GeneMeta.Rcheck/00install.out:
installing R.css in E:/biocbld/bbs-2.1-bioc/meat/GeneMeta.Rcheck
---------- Making package GeneMeta ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing data files
preparing package GeneMeta for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'GeneMeta'
Formats: text html latex example chm
CountPlot text html latex example chm
Nevins text html latex example chm
dstar text html latex example chm
f.Q text html latex example chm
tau text html latex example chm
zscore text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.1-bioc\meat\GeneMeta.Rcheck\00_pkg_src\GeneMeta\chm\GeneMeta.chm
Compile time: 0 minutes, 0 seconds
7 Topics
27 Local links
1 Internet link
1 Graphic
Created e:\biocbld\bbs-2.1-bioc\meat\GeneMeta.Rcheck\00_pkg_src\GeneMeta\chm\GeneMeta.chm, 25,307 bytes
Compression decreased file by 2,902 bytes.
adding MD5 sums
* DONE (GeneMeta)