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| Package 89/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
| GLAD 1.12.0 Philippe Hupe Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
| wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
| liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | OK | OK | |
| pitt | Mac OS X (10.4.10) | i386 | OK | OK | [ OK ] |
| Package: GLAD |
| Version: 1.12.0 |
| Command: /Users/biocbuild/BBS/utils/build-universal.sh GLAD_1.12.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R GLAD.buildbin-libdir |
| RetCode: 0 |
| Time: 22.2 seconds |
| Status: OK |
| PackageFile: GLAD_1.12.0.tgz |
INSTALLATION WITH 'R CMD INSTALL GLAD_1.12.0.tar.gz'
* Installing to library 'GLAD.buildbin-libdir'
* Installing *source* package 'GLAD' ...
Configuring variable environment
** libs
** arch - i386
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -DIS_MAC_OS -fPIC -g -O2 -Wall -march=nocona -c distance.c -o distance.o
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -DIS_MAC_OS -fPIC -g -O2 -Wall -march=nocona -c glad-function.c -o glad-function.o
g++-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -DIS_MAC_OS -fPIC -g -O2 -Wall -march=nocona -c glad.cpp -o glad.o
glad.cpp: In function 'void detectOutliers(double*, int*, int*, int*, int*, int*, double*, int*)':
glad.cpp:112: warning: comparison between signed and unsigned integer expressions
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -DIS_MAC_OS -fPIC -g -O2 -Wall -march=nocona -c hclust.c -o hclust.o
gcc-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -DIS_MAC_OS -fPIC -g -O2 -Wall -march=nocona -c laws.c -o laws.o
g++-4.0 -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o GLAD.so distance.o glad-function.o glad.o hclust.o laws.o -F/Library/Frameworks/R.framework/.. -framework R
** R
** data
** demo
** inst
** preparing package for lazy loading
Loading required package: aws
Loading required package: tcltk
Loading Tcl/Tk interface ... done
** help
>>> Building/Updating help pages for package 'GLAD'
Formats: text html latex example
ChrNumeric text html latex example
ColorBar text html latex example
GLAD-internal text html latex
arrayCGH text html latex example
arrayPersp text html latex example
arrayPlot text html latex example
as.data.frame.profileCGH text html latex example
as.profileCGH text html latex example
bladder text html latex example
cytoband text html latex example
daglad text html latex example
glad text html latex example
hclust text html latex example
kernel text html latex
myPalette text html latex example
plotProfile text html latex example
profileCGH text html latex example
snijders text html latex example
tkdaglad text html latex example
veltman text html latex example
** building package indices ...
* DONE (GLAD)
INSTALLATION OF ppc LIBS WITH 'R_ARCH=/ppc R CMD INSTALL --libs-only GLAD_1.12.0.tar.gz'
* Installing to library 'GLAD.buildbin-libdir'
* Installing *source* package 'GLAD' ...
Configuring variable environment
** libs
** arch - ppc
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DIS_MAC_OS -fPIC -g -O2 -Wall -c distance.c -o distance.o
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DIS_MAC_OS -fPIC -g -O2 -Wall -c glad-function.c -o glad-function.o
g++-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DIS_MAC_OS -fPIC -g -O2 -Wall -c glad.cpp -o glad.o
glad.cpp: In function 'void detectOutliers(double*, int*, int*, int*, int*, int*, double*, int*)':
glad.cpp:112: warning: comparison between signed and unsigned integer expressions
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DIS_MAC_OS -fPIC -g -O2 -Wall -c hclust.c -o hclust.o
gcc-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DIS_MAC_OS -fPIC -g -O2 -Wall -c laws.c -o laws.o
g++-4.0 -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o GLAD.so distance.o glad-function.o glad.o hclust.o laws.o -F/Library/Frameworks/R.framework/.. -framework R
* DONE (GLAD)