Package: tkWidgets

Version: 1.15.0

Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check tkWidgets_1.15.0.tar.gz

RetCode: 0

Time: 55.6 seconds

Status: WARNINGS

CheckDir: tkWidgets.Rcheck

Warnings: 1

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.1-bioc/meat/tkWidgets.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-08-06 r42439)
* checking for file 'tkWidgets/DESCRIPTION' ... OK
* this is package 'tkWidgets' version '1.15.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'tkWidgets' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... WARNING
'library' or 'require' calls not declared from:
  tools
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
eExplorer : codeChanged: no visible binding for '<<-' assignment to
  'newCode'
fileWizard : showMore: no visible binding for global variable
  'restList'
fileWizard : argSelected: no visible binding for '<<-' assignment to
  'selectedArg'
fileWizard : argSelected: no visible binding for global variable
  'restList'
fileWizard : argSelected: no visible binding for global variable
  'restEntry'
fileWizard : argSelected: no visible binding for global variable
  'selectedArg'
fileWizard : argSelected: no visible binding for global variable
  'restUp'
getPDFromFile: no visible global function definition for
  'getNameWidget'
getPDFromFile: no visible global function definition for
  'readFileByUserArgs'
pExplorer : browse: no visible binding for '<<-' assignment to 'subDir'
tkphenoData : <anonymous>: no visible binding for global variable
  'cov.name.label'
tkphenoData : <anonymous>: no visible binding for global variable
  'desc.lst'
viewVignette : back: no visible binding for global variable
  'backButton'
viewVignette : viewPDF: no visible global function definition for
  'tkMessageBox'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating tkWidgets-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating tkWidgets-manual.tex ... OK
* checking tkWidgets-manual.tex ... OK

WARNING: There was 1 warning, see
  E:/biocbld/bbs-2.1-bioc/meat/tkWidgets.Rcheck/00check.log
for details

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/tkWidgets.Rcheck


---------- Making package tkWidgets ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  preparing package tkWidgets for lazy loading
Loading required package: widgetTools
Loading required package: tcltk
Loading Tcl/Tk interface ... done
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: DynDoc
  installing man source files
  installing indices
  installing help
Note: unmatched right brace in 'listSelect' on or after line 57
Note: unmatched right brace in 'listSelect.Rd' on or after line 57
Note: unmatched right brace in 'pickFiles' on or after line 32
Note: unmatched right brace in 'pickFiles.Rd' on or after line 32
Note: unmatched right brace in 'pickObjs' on or after line 28
Note: unmatched right brace in 'pickObjs.Rd' on or after line 28
Note: unmatched right brace in 'tkSampleNames' on or after line 9
Note: unmatched right brace in 'tkSampleNames.Rd' on or after line 9
Note: unmatched right brace in 'widgetRender' on or after line 46
Note: unmatched right brace in 'widgetRender.Rd' on or after line 46
 >>> Building/Updating help pages for package 'tkWidgets'
     Formats: text html latex example chm 
  DPExplorer                        text    html    latex   example chm
  WName                             text    html    latex   example chm
  appendSepDir                      text    html    latex   example chm
  args2XML                          text    html    latex   example chm
  argsWidget                        text    html    latex   example chm
  colInfo-class                     text    html    latex   example chm
  dataViewer                        text    html    latex   example chm
  dbArgsWidget                      text    html    latex   example chm
  eExplorer                         text    html    latex   example chm
  fileBrowser                       text    html    latex   example chm
  fileWizard                        text    html    latex   example chm
  getLightTW                        text    html    latex   example chm
  getWvalues                        text    html    latex   example chm
  guess.sep                         text    html    latex   example chm
  hasChar                           text    html    latex   example chm
  importPhenoData                   text    html    latex   example chm
  importWizard                      text    html    latex   example chm
  listSelect                        text    html    latex   example chm
  objNameToList                     text    html    latex   example chm
  objViewer                         text    html    latex   example chm
  objectBrowser                     text    html    latex   example chm
  pExplorer                         text    html    latex   example chm
  pickFiles                         text    html    latex   example chm
  pickItems                         text    html    latex   example chm
  pickObjs                          text    html    latex   example chm
  setArgsList                       text    html    latex   example chm
  stdType                           text    html    latex   example chm
  tkMIAME                           text    html    latex           chm
  tkSampleNames                     text    html    latex           chm
  tkphenoData                       text    html    latex           chm
  vExplorer                         text    html    latex   example chm
  values.Widget                     text    html    latex   example chm
  widgetRender                      text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.1-bioc\meat\tkWidgets.Rcheck\00_pkg_src\tkWidgets\chm\tkWidgets.chm


Compile time: 0 minutes, 1 second
34	Topics
323	Local links
4	Internet links
1	Graphic


Created e:\biocbld\bbs-2.1-bioc\meat\tkWidgets.Rcheck\00_pkg_src\tkWidgets\chm\tkWidgets.chm, 71,538 bytes
Compression decreased file by 103,800 bytes.
  adding MD5 sums

* DONE (tkWidgets)