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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 197/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
rhdf51.7.1Biocore Team c/o BioC user listLast Changed Date: 2007-08-20 09:33:20 -0700 Last Changed Rev: 26527 | lamb1 | Linux (SUSE 10.1) | x86_64 | ERROR | skipped | |
wellington | Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | ERROR | skipped | skipped | |
pitt | Mac OS X (10.4.10) | i386 | [ ERROR ] | skipped | skipped |
Package: rhdf5 |
Version: 1.7.1 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build rhdf5 |
RetCode: 1 |
Time: 4.8 seconds |
Status: ERROR |
PackageFile: None |
* checking for file 'rhdf5/DESCRIPTION' ... OK * preparing 'rhdf5': * checking DESCRIPTION meta-information ... OK * cleaning src * checking whether 'INDEX' is up-to-date ... NO * use '--force' to overwrite the existing 'INDEX' * installing the package to re-build vignettes * Installing *source* package 'rhdf5' ... checking for gcc... gcc checking for C compiler default output... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ANSI C... none needed checking how to run the C preprocessor... gcc -E checking for egrep... grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for hdf5... yes checking for H5Fopen in -lhdf5... no checking hdf5.h usability... no checking hdf5.h presence... no checking for hdf5.h... no checking hdf5 in /sw... failed configure: error: please specify a valid hdf5 installation with --with-hdf5=DIR ERROR: configuration failed for package 'rhdf5' ** Removing '/private/tmp/Rinst2676170618/rhdf5' ERROR Installation failed. Removing '/tmp/Rinst2676170618'